Scomber scombrus (Atlantic mackerel): 133990419
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Entry
133990419 CDS
T10651
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133990419 (mib1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133990419 (mib1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133990419 (mib1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
Ank_KRIT1
ZZ
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133990419
NCBI-ProteinID:
XP_062284712
LinkDB
All DBs
Position
11:complement(17932810..17989438)
Genome browser
AA seq
1042 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGDVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHAAFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVGTRSPSLNSNIESLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVLCCGGKGMEDDAADDENDDDDDDDDDDDITGNSNTMAGGSQDLLQPNNLTL
SWSSGNIPALQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQL
CGDRMSECPICRKAIERRILLY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcagaaataaccgggcgatgatggaaggagtcggagccagagtggtccgc
ggacccgactggaagtgggggaagcaggatggaggagagggacatgttggcaccgtcagg
agttttgaaagtccagaggaggtggtggttgtctgggataatgggacggctgctaactac
cgctgctctggggcatacgacgtgaggatactagacagtgctcctacaggcatcaagcat
gatgggaccatgtgtgacacctgccgtcaacagcccatcattggtattcgctggaaatgt
gctgagtgcaccaattacgacctctgcacaacctgttaccatggagacaagcatcacctg
agacatcggttctacaggatcaccacaccaggcagtgagagagtacttttggagtcacgt
cgcaagtccaagaaaatcacagccagagggatcttcactggtggacgggttgtgagagga
gtggactggcagtgggaagaccaggacggaggcaatgggaggagaggaaaggtgacagag
atccaggactggagtgcagccagccctcacagtgctgcctacgtactgtgggacaatggg
gccaagaacctgtacagagttggctttgagggaatgtcggacctgaaatgtgttcaggat
gccaaaggaggctcgttttacagagaccactgtcccgttttaggtgagcagaatggcaac
agaaatcctggcggtcttcagatcggagacctggtcaacattgacctggacctagagatt
gtccagtccctccagcatggccacggggggtggactgacggcatgttcgagaccctcacc
accaccggaacagtatgtggcatcgatgaagaccacgacattgtggttcagtaccccagt
gggaacaggtggacattcaacccagcagtgctgacaaaggccaatgtggtgcgcagtggt
gatgtggcagctggagcagaggggggcagttcccagttcctagttggagacctggtccag
atttgctatgacatcgaccgcatcaagctcctacaacgaggccacggagagtgggctgag
gccatgttgcctaccctaggcaaggtgggccgtgtgcagcagatctactctgacagtgac
ctgaaggtcgaggtttgtggaacctcttggacgtacaatccagccgctgtcaccaagatt
gctccatcagggtctgctgttagcaatgcctctggagagcgtctttctcagttgctgaag
aaactatttgagacacaggaatccggagacatcaatgaggagttagtcaaggccgcagcc
aacggagacttggccaaggtggaggatattctaaagagacctgatgtggatgtgaacggg
cagtgtgcaggacacactgctatgcaggcagccagtcagaatggtcacgtggatgttcta
aagctgctgcttaaacacaatgtggacctagaggctgaggacaaagatggagaccgggcg
gtgcaccatgcagcctttggcgatgagggctctgtcattgaggtgctgcaaaggggcggt
gctgacttgaatgccaggaacaagcgaaggcagactcctttacacatagctgtcaacaag
ggccacttgcaggtggtcaaaaccctgctggactttggctgccacccaagcctccaggat
tcagagggcgacacccccctgcacgatgccatcagcaagaaacgagatgacatgctgtca
gtcctgctggaagctggtgcagatgtcaccatcaccaacaataatggcttcaacgccttg
catcacgccgccctgcgaggaaaccccagtgccatgcgtgtgctgctatccaaactgcca
aggccctggattgtagatgagaaaaaggatgacggttacaccgcattgcatctggctgct
ctcaacaatcatgtggaggtggctgagctgttggtccaccagggcagcgccagcttagac
atccagaatgtcaaccagcagacagccttacatctggcagttgagcgtcaacacacccag
atagttcggctgctggtgcgggcagaggccaagcttgatgtgcaggacaaggacggggac
acaccacttcacgaggcactgcgtcaccacacattgtcccaactgcgacaacttcaagat
atgcaagatgtcagcaaagttgagccctgggaaccctccaagaacacattaatcatgggc
ttaggcacccagggggcagaaaagaagagtgctgcatccatcgcctgcttcctggctgcc
aacggagcagacttgaccattcgtaacaagaagggccagtcccctctcgacctgtgtcct
gaccccagcctctgcaaggctctggccaaatgtcacaaagagaagagcagtggccaggtg
ggcacccgcagcccgtctctgaacagcaacattgagtctttggaagagtgtatggtgtgt
tcagacatgaagagagacactctgttcgggccctgcggacatatcgccacctgctccctc
tgctcgccacgcgtcaagaagtgtctcatctgcaaagatcaggtccagtcaagaacaaag
attgaggagtgtgtagtctgctctgacaaaaaggcagcagtgttgttccagccctgtggt
cacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacagtgccgggct
gtggtggaacgccgcacccccttcgttctttgctgtggagggaaaggtatggaggatgat
gccgctgatgatgagaatgatgatgatgatgatgatgatgatgatgatgacattacaggg
aactctaacactatggcagggggatcgcaggatcttctccagcccaacaatctgacacta
agttggtctagcggaaacattccagctctgcagagagacaaagacaacactaacgtcaac
gctgatgtacagaaactacagcaacagcttcaggacatcaaggagcagaccatgtgtccg
gtgtgcctggaccggctgaagaacatgatcttcatgtgcggccacggcacctgccagttg
tgcggggaccgaatgagcgagtgccccatctgccgcaaggccatcgagcgccgcatcctc
ctctactag
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