Scomber scombrus (Atlantic mackerel): 133990421
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Entry
133990421 CDS
T10651
Name
(RefSeq) semaphorin-6B-like
KO
K06842
semaphorin 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
133990421
NCBI-ProteinID:
XP_062284718
LinkDB
All DBs
Position
11:12478027..12491570
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AA seq
899 aa
AA seq
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MCSAAMATMAPPLTFLLLLLQLADGSFPEEPSPLSYVPIEVVRRYPVFLGRAHRSAQRQE
LHIQTVLQVNRTLYIGARDDLYRVELDNAAGDEMFYSKKRTWESNKNDIRVCRMKGKHEG
ECRNFIKVLLSQHGGLFVCGTNAFNPLCANYTKDTLEMVGEPVSGMARCPYDPRHANVAL
FSDGSLFTGTVTDFLAIDAVIYRSLSDSPALRTVKHDSKWFREPYFVSAMEWGPHIYFFF
REMAMEFHHLEKVMVSRVARVCKADLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLL
HATSNIIHMQGRDVILGLFSTPPNSIPGSAVCVFDMQQLAHVFEGRFKEQKSPESIWTPV
PDEAVPKPRPGGCAVQGSRFSSSTTLPDEVLNFVKTHPLMDETVPLLGHRPWVVKTMGRY
QLTSMVVDTEAGPHKNRTVLFLGSTRGTILKFLMVPVGDSASHSSVFLEEVEGFNPEKCG
EDSPQARQLLSLSLDRVSHTLLLAFPSCLVRVPTSRCHLHSRCMKSCLASRDPYCGWTRG
STCSFLRPGTRLPFQQDVEYGNTTSHLGDCDGILQQSLLIEPESLVSLNLLVASAVSAFT
IGAALSGLAVCWIMAHKPANRRHGSPPQSSIQRRERSLLSNGGGMGGSVLSVTRQGGGER
PCSQGGETLFVMPNGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSNSGGWDTSQTYLGG
GSVGLGSPCRMPPSVYLTTRLFPQGGGGRHSGECRGTDMPRQHYVCLSKQEKGVKGTPKV
PLRKSAGEYVYPMTPQDSPERRRVVSAPSAPMEYGEPLPLRWPAQEGYILSSHCMVPVPL
PPPSMPAPSGQAYVSQQHNPGLSRALLRGALERGELGELVDLSQLMSKKNCSDRTQTGQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctgctgccatggcgaccatggctcctcctctcacatttcttctcctgctgctt
caactggctgatggctcattcccagaggaacccagtccactcagctacgtccccattgag
gtggtgagaaggtatccagtgttcttgggcagagctcatcgttcagcacaaagacaggag
ctgcacatccagacggtcctccaagtcaaccgcacgctctacataggagccagagatgac
ttgtacagagtggagctagataacgcggcaggtgatgagatgttctacagcaagaaacgt
acatgggaatccaacaaaaacgacattcgagtatgccggatgaagggcaaacatgaggga
gagtgccgtaattttatcaaggttctgctcagccagcacggtggcctgtttgtctgtgga
acaaacgccttcaacccactgtgtgccaattacactaaagacactctagaaatggtggga
gagcctgtcagtgggatggcacgctgcccatatgatccacgacatgccaatgtggcttta
ttctcagatggaagcctctttaccggtactgtgacagacttcctggccatcgatgcagtg
atctatcgtagcctcagcgacagccccgccctccgcacagtcaaacatgactccaaatgg
ttcagagagccctactttgtgagtgccatggaatgggggcctcatatttatttcttcttc
agagagatggccatggagtttcatcatctagagaaggtgatggtgtctcgtgtggctcgt
gtgtgtaaagcagacctgggtggttctcagcgcgtccttgagaaacagtggaccacgttc
ctgaaggctcgcctcaactgctccgtccctggagactcacatttctatttcaacctctta
cacgccacaagcaacattatccacatgcaaggacgagacgtcatcctgggtcttttctcc
acaccaccaaacagcatccccggctctgctgtgtgtgtgtttgacatgcagcagcttgct
catgtctttgagggccggtttaaagagcagaaatccccggagtctatttggactccagtc
ccagatgaagcagtgcccaaaccgagaccaggaggatgtgcagtccagggatccagattt
agctcttctaccacgctacccgatgaagtgctgaactttgtgaagacccacccactgatg
gatgagacggttccactgctggggcacagaccctgggtggtcaaaactatgggacggtac
cagttgacatccatggtggtggacacagaagctggtcctcataagaaccgcacagtcttg
ttcctgggttcaacccgagggaccatcctcaagtttctaatggtccccgttggagattct
gcctcccactccagtgtgttcctggaggaggtggagggattcaacccagagaagtgtgga
gaggactctcctcaggctcgtcagctcttgtctctgtcattggaccgggtgagccacact
ctgctgctggcctttccttcctgtctggtccgagtgcccacatcacgctgtcacctacac
tcccgctgcatgaagagctgtctcgcctccagggacccatactgtggctggaccagaggt
agcacctgctccttcctgagaccaggcacacggctcccttttcaacaagatgtggaatat
ggaaacaccacctcccatctaggagactgtgatggaatcctgcagcagagtctgctgatc
gaaccggagagcctggtctccctcaatctgctggtggcatctgcagtctctgcattcacc
attggggcggcgctctccggccttgctgtgtgctggattatggcccacaagcccgccaac
cgccgccatggcagccccccccaatcctctattcagcggcgtgaaaggagcctgctgagt
aacggtggtgggatgggaggctcggtgctcagcgtgacacggcagggaggtggggaacgc
ccttgctctcagggcggggagaccctttttgtcatgcccaacggctgggtgaagtcagga
gagctcgacccaggtttcctgcccaccccggagcacacgccccagcagaaacgcagaggc
ctacgactgtcagactcaaattccgggggatgggacactagccagacctacctgggagga
ggctctgtgggtctgggctcaccctgtcgtatgcccccttccgtctacctgaccaccaga
ctgtttccgcaggggggaggtgggagacacagtggtgaatgccgggggaccgacatgcca
cgccagcactatgtctgcttgagcaagcaagaaaaaggagtgaaggggacgcccaaagtt
ccactcagaaagtctgcaggagaatatgtataccccatgaccccccaggactcgcctgag
cgtcggagggtggtctcagctcccagcgcgcccatggagtatggcgagccattacctttg
cgttggccagcccaggaaggatacatcctcagcagccattgcatggtccctgtccccctg
cctccaccctctatgcccgctcccagtggccaggcgtacgtgtcccagcaacacaacccg
gggctgagcagggctctgctgagaggggccctggagcgaggggagctgggcgagctggtg
gatctgagccagctgatgagtaagaagaactgcagtgacaggactcagactggccagtga
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