Scomber scombrus (Atlantic mackerel): 133990530
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Entry
133990530 CDS
T10651
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00061
Fatty acid biosynthesis
ssco00071
Fatty acid degradation
ssco01100
Metabolic pathways
ssco01212
Fatty acid metabolism
ssco03320
PPAR signaling pathway
ssco04146
Peroxisome
ssco04216
Ferroptosis
ssco04920
Adipocytokine signaling pathway
Module
ssco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
133990530 (acsl3b)
00071 Fatty acid degradation
133990530 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133990530 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
133990530 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133990530 (acsl3b)
03320 PPAR signaling pathway
133990530 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssco01004
]
133990530 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133990530 (acsl3b)
Enzymes [BR:
ssco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
133990530 (acsl3b)
Lipid biosynthesis proteins [BR:
ssco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
133990530 (acsl3b)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of breast milk
133990530 (acsl3b)
Exosomal proteins of breast cancer cells
133990530 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
133990530
NCBI-ProteinID:
XP_062284855
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All DBs
Position
11:complement(13791921..13803331)
Genome browser
AA seq
711 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFIPWYFFSGAGSNLERARRIKARSVSRHPAGPYR
AINSQEKLVAWLHPGVDTLDKMFEYAARRFPQRDCLGTREVLSEEDELQPNGKVFKKVIL
GNYNWLSYEEAYQAAKSFGSGLAALGQRPQCNIAIFCETRAEWIVAAQSCFMYNFPLVTL
YATLGPAAIAHGLNETEVTHIITSKDLLQSRLRAILCDVPRLQYVIVVDTKPTSWSDIPR
GITIYNMDTVKDMGSTPDNIAVDRTHPEPSDIAVIMYTSGSTGIPKGVMISHGNIIAGIT
GMAERIPDLNETDTYIGYLPLAHVLELSAELVCVSHGCRIGYSSPQTLADQSTKIKKGSK
GDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSKFQKTLFVLAYNYKMEQISKGYSTPLC
DSLVFKRVRSLLGGNTRVLLSGGAPLSAATQHFMNICLCCPVGQGYGLTETCGAGTISEV
WDYSTGRVGAPLVCSEIMLKDWEEGGYYSTDKPNPRGEILIGGPNVTMGYYKNEGKNRED
FYVDQKGQRWFCTGDIGEFHSDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCSLIDN
ICAYANSDQSYVISFVVPNHRQLMALAEQRQVRGTWEDICNNSQMEKEVLRIITEAAISA
KLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKTHYQEDIERLYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggatatgaaccccctgcttctgcaggtcttccgctctgtggtctgg
gtctactctgtcatcaccttcataccctggtacttcttctctggagctggctccaacttg
gagcgggctcgccggattaaggcacgctcagttagcagacacccagcagggccttacagg
gccatcaacagccaagagaagctggtggcttggctgcaccccggggtggacacgctggat
aagatgtttgaatacgctgccaggaggtttccacagagagactgtctgggcaccagggag
gttctcagtgaggaggatgagctgcagcccaacggcaaggtcttcaagaaggtaattctg
gggaactataactggctgtcatatgaggaagcctaccaggcagcaaagtctttcggcagc
ggtctggcagctcttggccagaggcctcagtgtaacatcgccatcttctgtgagacccga
gctgagtggatcgtggcagcacagtcctgcttcatgtacaattttccactcgtcacactg
tacgccactcttggacccgcggccattgcccacggcctgaacgagaccgaggtcacgcac
atcatcacaagcaaagacctgctgcagagccgtctcagggccatactgtgtgatgttccg
aggctgcagtatgtcatcgtagttgacaccaagcccacaagctggtcagacattcccaga
ggcatcaccatctacaacatggacactgtgaaggatatgggatccacgcctgacaacatc
gcagtcgaccgcacacatccagagccctcggacatcgctgtcatcatgtacaccagcggc
tccacgggcatccccaagggtgtaatgatctcccatggcaacatcattgctggcatcact
ggcatggctgagcggatccctgacctcaatgaaacagacacctacattggctacctaccg
ttggctcacgttttagagctcagtgctgaactggtgtgcgtctctcacggctgtcgcatc
ggatactcctcccctcagactctagccgaccagtctaccaaaataaaaaagggcagtaaa
ggagataccagtgtgttgaaacctactctcatggctgctgtaccagagatcatggatcga
atctataagaatgtgatgactaaagtggaggagatgagcaaattccagaagacactcttt
gtgctggcttacaactacaagatggagcagatctccaaaggctacagcacgcctctctgt
gacagtctggtgttcaaacgggtgcgctcgctgttgggagggaacacacgggtgctgctt
tctggcggagcgcctctctcggccgccacgcaacacttcatgaatatctgtctgtgctgc
cccgtggggcagggctacggtctgacggagacgtgtggagcaggcaccatcagtgaggtt
tgggactacagcacaggacgggttggcgctccgcttgtttgctcggaaatcatgctcaag
gactgggaggagggtggttactacagcacagacaagcccaacccacggggggaaattttg
atcggcgggcccaacgtaacgatgggttactacaaaaacgaaggcaagaaccgggaggac
ttttatgtggatcagaagggtcagagatggttctgcaccggggacatcggggagttccac
tctgatggatgcctcaagatcatcgatcgtaagaaggatctggtgaagttgcaggcagga
gagtacgtctcattaggaaaagtggaggctgttttgaagaactgctcgcttattgacaac
atctgtgcctatgccaatagtgaccagtcatacgtgatcagctttgtggtgcctaaccac
agacagctaatggcgctggcggagcagaggcaggtgaggggcacatgggaggatatctgt
aacaactcccagatggagaaagaggtcctccgcatcattactgaggctgctatctcagca
aaactggagcgatttgagatccccaagaaaatccggctgagtgctgaaccctggactcca
gagaccggcttggtcactgacgcattcaaactgaaacgcaaggagctcaaaacacactac
caagaggacattgagaggctgtacggtggcaaataa
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