Scomber scombrus (Atlantic mackerel): 133990548
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Entry
133990548 CDS
T10651
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2 isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133990548 (rnf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133990548 (rnf2)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133990548 (rnf2)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133990548 (rnf2)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133990548 (rnf2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
133990548 (rnf2)
Noncanonical PRC1 (PRC1.1)
133990548 (rnf2)
Noncanonical PRC1 (PRC1.3/1.5)
133990548 (rnf2)
Noncanonical PRC1 (PRC1.6)
133990548 (rnf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
zf-C3HC4_5
CAMSAP_CC1
zf-ANAPC11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
133990548
NCBI-ProteinID:
XP_062284876
LinkDB
All DBs
Position
11:complement(3321696..3332467)
Genome browser
AA seq
344 aa
AA seq
DB search
MTQTVQTNGVQPLSKTWELSLYELQRTPQAQEAITDGLEIAVSPRSLHSELMCPICLDML
KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRD
EYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNGDSSH
CSNASVHSNQEAGPSIKRTKTSDDSGLDMDNAAENGGGDSVIDGGASEIELVFRPHPTLM
EKDDGHNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNAEASPVNVEAASEKQYT
IYIPTAGNQFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacagttcagaccaacggggttcagcccctcagtaagacctgggagctgagc
ctgtacgagctacagagaactccacaggcacaggaggctataacagacggactggagatc
gctgtgtcgcccaggtccctgcacagtgaactgatgtgtcccatctgtctggacatgttg
aagaacacaatgacgaccaaagaatgtctgcaccgcttctgcgccgattgtatcatcaca
gctttgagatctggtaacaaagagtgtcctacctgtcgtaagaagctggtgtccaagagg
tcgctgcgtccagaccctaattttgatgctctaattagtaagatttatcccagccgcgac
gagtacgaagcccaccaggagagagtgttagcccgcataagcaaacacaacaaccagcaa
gccctgtcccacagcatagaggaggggctcaagatacaggctatgaccaggctgcagcgt
ggtaaaagacacacagtggagaacggcagcggagccgaagacaacggagactcttcccac
tgtagcaacgcctctgtccacagcaatcaggaggcgggtccgagcatcaaacgcaccaag
acgagtgacgacagcggcctggacatggacaacgctgcagagaacgggggaggggactct
gtgattgacggcggcgcaagcgaaatagaactggtgtttcggccacatcccaccctgatg
gagaaggacgacggtcacaacagtgtggagttcgtccctcgctacattaagacatccggg
aacgccacagtggatcacctgtctaaatacctggctgtgagactggctctggaggagctg
agaagaaatgcagaggctagtcctgtgaacgtggaggcagcttcagagaaacagtacacc
atctacatccctactgctggaaaccagttcactgtcctgaacggttctttctctctggag
ctggtcagcgaaaagtactggaaggtgaacaaacccatggagctctactttgcccctact
aaagaacacaagtag
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integrated database retrieval system
