Scomber scombrus (Atlantic mackerel): 133990587
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Entry
133990587 CDS
T10651
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133990587 (ndc1)
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NCBI-GeneID:
133990587
NCBI-ProteinID:
XP_062284931
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Position
11:26121902..26131273
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AA seq
669 aa
AA seq
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MFSAEQSCWFVRKVICWRAAASIAWAVLLLPPTTSVFVILGGFSLFHPIQTISECLTLIG
SASAMLSLILLCGVILMVGFLNLEYYTVIPTIACSRIALLGQLLHPHQFVNSLAHCIMGV
IVAGCCAVIIGGRYETLGYPCTQTDGSPQMCLNEYHLLLLLAGAFVGFSHSLSGVIHNMN
YVSFHAVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIVVYLFLGYIPRAWICKTLDLHL
NSSVHTLDTVTGLLDLSLFYHLWISATFLLFTWYITLLLFRIFVTEVYSFPVQSSFTDVA
LQCLPKVLTDKQPVILKFLALQDLALLSQHSPSRRAEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLVAYHDTVQTNGRAKSLSTGSERKTSSETSVTSGTEDLMSPRPNLLMKTPAS
VFSRSIVGGPLSPLTAPFTPDLNSPFASPAMRRLTAPAEQCSPWHGSVQSPHIMRRVPKL
WSTSTDSQSNGSPPPSPASVLSPKQESSKPSLLALFLQNRKEQVKHFLGKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVEASFSEDQFGVVQTALPSILSCMLVLQEAVDRH
FKLPHASSKPVRSTSSMGESSYKTLRFALRATLKTAIYRITTTFGDHLNAVQMSAEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcagagcaaagttgctggtttgtccgtaaggtgatatgttggagagctgcg
gccagtattgcctgggctgtcctcttgttgccacccaccacatctgtattcgtgatcctc
ggcggattcagtctttttcaccccatccagacgatatcagaatgtctgaccctcatagga
agtgcaagtgccatgctctctcttatcctactgtgtggagtgatcctcatggttggcttc
ctgaacctcgagtattatacagtcatcccaacaatcgcatgctcaagaatcgcccttttg
ggtcagctgctccaccctcatcagtttgtcaactccttggcccactgcatcatgggagta
atcgtggccgggtgttgtgccgtcatcatcgggggcagatacgagacgcttggctaccct
tgtacacagactgatggctctcctcagatgtgtctgaacgagtatcacctcctccttctg
ctggcgggagcctttgtgggattttctcacagtctgtcgggtgtgatccacaacatgaac
tacgtttctttccacgctgttcagcaatacaagtaccttcgctttaagggatccttacct
ttggtggtgaagtgcagtgccactcaagcactttactctatcaggaactacattgtagtt
tatttatttttgggttacatcccgagagcatggatctgtaaaacactcgatctccatttg
aacagctccgtccatactcttgacaccgtcactggactgctggacttgtccctgttctac
cacctgtggatcagtgccaccttcctcctcttcacatggtacatcacactgctgctcttc
aggatctttgtcactgaggtgtacagttttcctgtgcagtcgtcttttacagatgttgcc
ctccagtgtcttccaaaagttcttactgacaagcaaccagtgatactgaagtttctagcc
ttgcaggacttggctctgctgtctcaacactccccatcacgacgcgctgaggtcttcagt
ctgagtcaaccaggtggtcatcctcataactggaacgccatcagcaaggagtgtttgtct
ttgctggctgacctcacccagagactcgtagcctatcatgatactgttcaaaccaatggc
agagcaaaatcactgtctacgggaagtgaaaggaagacttcatctgagacgtcagtaacc
tcaggcacagaggatctcatgagtccgaggcccaatttactgatgaaaacaccggcctct
gtcttttcccgctccatcgttggcggccctctgagccctctgacagcaccgttcacccct
gacctgaacagccccttcgcttctccagccatgcggcgtctcactgctccggcggaacag
tgctcaccgtggcacggctccgtgcagagcccccacatcatgaggagagtcccaaaactc
tggtccacctccacagattcacagtccaatggtagtcctcctccatcccctgcctcagtt
ctcagtcccaagcaggaatcctccaaaccaagtctcctggctctgttcctccagaacaga
aaagaacaggttaaacatttcttgggaaagcgggtgctgataatgtatttgtttaacaag
ctcccagaagcctccagtcaagctctgtttgcagacagccaggctcacatctgggcttta
gaggggctttcttacctcgttgaagcctctttctcagaagaccagtttggcgtcgtacag
actgcactacccagcattctcagctgcatgctagtcttacaagaggctgtagatcgacac
ttcaagctgcctcacgcctccagtaagcctgtcaggtcaacgagcagcatgggagaatct
agttacaaaacacttcgctttgctctcagggccacactcaagaccgccatttacaggata
acaaccacctttggagatcacttgaatgctgttcagatgtctgcagagcaccggaaacga
ttgcaacagtttctggagtacaaggaatag
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