Scomber scombrus (Atlantic mackerel): 133990639
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Entry
133990639 CDS
T10651
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04217
Necroptosis
ssco04620
Toll-like receptor signaling pathway
ssco04621
NOD-like receptor signaling pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133990639 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133990639 (ticam1)
04621 NOD-like receptor signaling pathway
133990639 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133990639 (ticam1)
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GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
SCAP_N
Motif
Other DBs
NCBI-GeneID:
133990639
NCBI-ProteinID:
XP_062284996
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Position
11:complement(13338038..13340743)
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AA seq
562 aa
AA seq
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MSHKGPENQGTGLRDVYDILVKVPPERLRSLTFQLRESTEDNIIHALCLIFLQQEEQALN
KLQMLTDNNLANHLVETWKMSRGKLEDFAVRCSNSQEFTRESLAALARIFKVLSEQRLCD
QPLRNLAYKRALSTESQKRSNGVDLEYDLLREEAKTVCGPSFAEMMCSFSNLKLGSSHDS
HSSRNEGNTTLKVTLSQDQSESGLPSPLHAGSSLPSYPTHLEISTPPTATFHGDRITPQT
SGSAEQSTAVSAGNEVKTAPEESKLKSNEPPLFKNTKMDTAFTTECSKTETPNQTTEPKF
SLPTATPKMTETDKMHECKGAEKEEEEIFYAFVILHAQEDAEVAESLKEKLEAIASSEGA
TFSDDFAIPGKSTFRCIEDAINNSAFTLLLLTCNFTRLQEMMTDSALINSINHKHKYNTV
IPLLPMENRMPKLSMPIVLQSIIPLDEKKNFDKKARKILSPANINKQKRIWMEEQRVKLQ
IERQEALKHLNQHQKQLIQECKRTQLLEQETLNHIMIHNRNFQSGCQPIINITNSQYVMI
GDDSQMTVGHGGGDSIQGDEEQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacaagggaccagaaaatcagggaacaggactgagagacgtttatgacattcta
gtcaaggtacctcccgagcgacttcggagtctgacattccagctgcgtgagtctactgaa
gataatatcatacatgccttatgtctgatttttcttcagcaagaggagcaggccctgaac
aaactccagatgctgacagacaacaacctcgctaaccatctggttgaaacatggaaaatg
agtcgaggcaaattagaagattttgcagttcgctgcagtaattctcaagagttcacaaga
gagtctcttgcagctttagctcgaatttttaaagttttgtcagaacaaagactgtgcgat
caacctttaagaaatctggcgtacaagagagccctttccactgagagccaaaaaagaagc
aacggtgtggatctggaatatgatctactcagagaggaagctaaaactgtctgtgggccc
tcgtttgcagagatgatgtgttctttcagcaacctcaagttagggtcttcccatgattct
catagcagccggaatgaaggaaatacaactttaaaagtgactctgtctcaggatcagtca
gaaagtggtttgcccagcccactgcatgcgggctcctcactaccatcatatcctactcat
ctggagatcagcactcctccaacagccacatttcatggggacagaataactccacaaaca
tcaggaagcgccgaacaaagcactgccgtctccgctggtaatgaagtgaaaactgctcct
gaggaatctaagcttaaatccaatgaacctcctctgtttaaaaacacaaagatggataca
gcgtttacaacggagtgcagtaagacagaaactccaaaccaaaccactgaaccaaagttt
tcactacctactgcaacacccaagatgactgaaacagataagatgcatgaatgtaaaggt
gcagaaaaggaggaagaagaaatattttacgcttttgttatcctgcatgcacaggaagat
gcggaagtagccgaaagcttgaaagaaaaactggaagctatcgccagtagcgaaggcgca
actttctctgatgactttgccatccctggaaagagcacttttaggtgtatagaggatgct
atcaacaactcagcttttacccttctgctgctcacctgcaacttcactcgtttgcaggag
atgatgacagactcggccctcatcaactccataaaccacaaacataagtacaacactgtt
atccctctgctgccaatggagaaccgcatgcccaaactaagcatgcccatagttctgcag
agtataattccactggatgagaagaagaactttgacaaaaaagcacgcaagatattgtca
ccagcgaatattaataaacagaaaagaatttggatggaggagcagagagtgaaattgcag
atagagagacaggaggcacttaaacatttaaatcaacatcaaaagcagctgatccaagag
tgtaaaagaacacagctgctagaacaggaaacactgaaccatataatgatacacaaccgc
aattttcaatcagggtgtcaaccaatcattaacattacaaattctcagtatgttatgatt
ggtgatgactctcaaatgactgtgggtcatggtggaggtgattcaattcagggagatgag
gagcaataa
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