Scomber scombrus (Atlantic mackerel): 133990653
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Entry
133990653 CDS
T10651
Name
(RefSeq) desmoglein-2-like protein
KO
K07597
desmoglein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04382
Cornified envelope formation
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133990653
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133990653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133990653
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Major cadherins
133990653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
FAM27
Motif
Other DBs
NCBI-GeneID:
133990653
NCBI-ProteinID:
XP_062285021
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All DBs
Position
11:16681939..16692241
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AA seq
1131 aa
AA seq
DB search
MAPLLKCSLFILFAFNLELVSVGAKGNGPVLQRQKREWIIAPRQLKENRDYTGLESIARI
RSDKENYTQIIYSLTGPGVDQPPTGVFGVNHQNGFVKIFSILDREAIPFYHLKGMARYQN
GTPAENDIDLRITVMDENDCLPIIKVQQVGSVNESSAAGTVVMKVIATDADQENTPHSMI
YYRIVEKSNVGGMFSINSQTGEVIVKRNNLDRETKDTYKLTIEASDLNGQVGGNKGTGEI
EIKILDINDNIPTLEKESYEGSVEENTINVEVTRIKAVDMDLIHTDNWLAVFEIVSGNEA
GYFSITTDSKTNEGIIMIHKALDYEEMKELHLEVAVSNKAVYNFGSGSMTGATISKSYPI
KINVINQKEGPRFQPTVKVVSISEDHTSVSLNKVIATYAAIDSDTLKTATNVRYAKIRDD
DNWLIIDEKTADIRLNKLPDRESKYLVNGTYYAKIICITNDTPSKTATGTIAIQVEDFND
HCPKLTATSHTMCIEHNVIYATAIDEDEFPNSAPFEFTVIPGSSKGKWTVEHLNETTAIL
RDQANLWPGIYKVAVEVKDQQGKSCAAVQMMDITVCTCDENTKTCMSRRTVTAGFGAAGV
LLLLLGLLLLLLVPLLLMFCLCGGAAAMGNFKAIPFDTKQQLISYHTEGQGEDKEIPLLH
VPVEVDCGVMNAQNINTYNGQGYLGGLTEFGGAAGGAAGGAALGGAFNTSTLTAENMHLY
NQYKHSTGHMNVDAGMMTGQEHHYSQYRAGAFDGMALSDHFLGEYYLSKSDHATQQSQQK
DSLLIYDYEGQESLAGSVGCCSLLENDDGLAFLNDLGPKFKTLAEICKGSTFVMESVGAE
VSMSPPRPVSPIRPSTHTHIHTHTETIRDRDRVNLNTLNTSNVASGSSTIFQEQQLTERT
HGLATVPKVHVQDNVVIPSQTLLIQQPAMYYAATPMYVVDSNPQVMLVAGGAQQAVSQVA
QVGLSQGLMQVGGLQGTQGAVLVERQVGMGGVTGQAAQGLSLGTLSRQDAQGLSLGTLSR
QDAQGLSLGTLSRPTQMLVVENGSSGGGQGAHLVQTFVQTGQGSTEQGLAVKGQGMQMKT
QSFTPGLHGFTGSDEDFVLTATPSLQGSQRVVVQHKKVSVTERNIESSSRA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggctccactgctgaaatgcagtctttttatcctgtttgcgttcaacttagagcttgtt
tctgtgggggcaaaaggaaatgggccagtgttacagagacagaagagagaatggatcatt
gctcccagacagcttaaggagaaccgcgattacaccggcttggagagtattgctagaatt
cgttcagataaagagaattatacacagataatctattcactaacagggcctggtgttgac
cagccccctactggtgtatttggtgtcaaccatcaaaatggttttgtgaaaatcttctcc
attttggaccgtgaggcgatccccttctatcatctaaaaggtatggcaagataccagaac
gggacccctgcagaaaatgatattgaccttagaattactgttatggatgagaatgactgt
ctaccaatcattaaagtgcagcaagttggatctgtcaatgaatctagtgcagcaggtact
gttgtcatgaaagtgatagctactgacgcggatcaagagaacacgccccactccatgatc
tactaccgcattgtggaaaagagtaatgtaggtgggatgttcagcatcaactcccagacc
ggagaagtcatagttaagcggaacaatcttgatagagagacaaaagatacatataagttg
actatagaagcctctgacctaaatggacaagtgggaggaaacaaaggaaccggagaaatt
gagataaaaattctggacataaatgacaatattcccaccctggaaaaggaatcgtatgag
gggagtgtggaggagaatactatcaatgtggaagtgacgaggatcaaagctgttgacatg
gatttgattcacactgacaactggctggcagtcttcgaaatagttagtgggaatgaggct
ggctatttcagcatcactactgattctaagaccaacgagggaattatcatgattcacaag
gctctggactatgaggaaatgaaggagctccacttggaagtggctgtttccaacaaagca
gtatataattttggcagtggaagcatgacaggcgccacaatctcaaaatcctaccccatt
aaaatcaatgtgatcaatcagaaggaaggcccccgtttccaaccaactgtcaaagtggtg
tccatctctgaggaccatacttccgtttccttaaacaaagtcattgccacctatgctgct
attgacagtgacacgttaaagaccgccaccaatgttaggtatgctaaaatccgtgatgat
gacaactggttgattattgatgagaaaacagcagatatcagactgaataaactgcctgac
agagagtccaagtacttggtcaatggaacatattatgccaaaataatatgtatcaccaat
gatactccctcaaaaactgccacagggaccatagccattcaggtcgaggactttaatgat
cactgtccgaaactgactgctacaagtcataccatgtgcattgagcataatgtgatctac
gcaacagccatagatgaagatgagttccctaattcagcaccatttgagtttactgtgatt
ccagggagcagcaaagggaaatggacagtggagcatcttaatgaaaccaccgccattctg
cgagatcaagccaacctgtggccaggcatatacaaagtggcagtggaggtcaaagatcag
cagggaaagtcatgcgctgctgttcagatgatggacataactgtgtgcacttgcgatgaa
aacaccaaaacttgtatgtctcgtagaacagtgactgcaggttttggagctgcaggtgtt
ctactattgctgctgggactgctgctgcttctactggtgcctcttctgctgatgttctgc
ttgtgtggaggtgcagcagctatgggaaacttcaaggccattccatttgatactaaacaa
cagcttatctcatatcacactgaaggacagggagaagacaaggaaattcctctcctacat
gtcccagttgaagtcgattgtggagtaatgaatgcccagaacatcaacacctataatgga
caggggtacctaggaggactgactgaatttggaggagcagcaggcggggcagcaggcgga
gcagccttaggtggtgcctttaacacttccaccttgacagctgagaacatgcacctgtac
aaccaatataagcactccactgggcacatgaacgtggatgctgggatgatgacaggacaa
gaacaccactactcccaatacagagctggggcctttgatgggatggctctatctgatcac
ttcctgggagagtattatttaagtaaatcggaccatgctacacagcaatcccagcagaag
gatagtcttctgatatatgactatgagggtcaggagtcactggcaggttctgttggctgc
tgcagccttcttgagaatgatgatggccttgcgttcctgaatgatcttgggcctaaattc
aaaaccctggctgaaatttgtaagggatctacctttgtgatggagtctgtgggtgcagag
gtttctatgtctccacccagaccagtgtctcccatcaggccctccacccacacacacatc
catacacacacagaaacaatcagggacagggaccgtgtcaacctcaacaccctcaacacc
tccaatgtagcgtctggatcgtccaccatttttcaagagcagcaactcactgagagaacc
catggtttagccactgttcccaaggtacatgtccaggacaatgttgtgattcccagtcag
acactgctcatacaacagccagctatgtactacgctgccacccccatgtatgtagttgac
tccaatccccaagtaatgcttgtggcagggggtgcccagcaggcagtgagtcaagtagct
caggtcgggctaagtcaaggcctaatgcaagttggaggcctgcaaggtactcagggtgca
gtacttgtagaaaggcaagtaggaatgggtggagtgacagggcaggctgcacaaggactc
tcattaggaaccctctccaggcaggatgcacaaggcctgtctttaggaaccctctccagg
caggatgcacaaggcctctctttaggaaccctctccaggcccacacaaatgttggtggtg
gagaacgggtcttcaggtggagggcaaggtgcacacttagtgcagacatttgttcaaaca
gggcagggatctacagagcagggcttggcggtcaaaggtcaaggcatgcaaatgaaaact
cagagttttacaccggggttacatggttttacagggtcagatgaagactttgtcctgaca
gccacacccagtctgcaagggagccagagagtagttgtgcaacataagaaggtttcagtc
actgagagaaatattgaatctagttccagagcataa
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