KEGG   Scomber scombrus (Atlantic mackerel): 133990669
Entry
133990669         CDS       T10651                                 
Name
(RefSeq) cullin-3-like isoform X1
  KO
K03869  cullin 3
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120  Ubiquitin mediated proteolysis
ssco04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133990669
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    133990669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssco04121]
    133990669
   03400 DNA repair and recombination proteins [BR:ssco03400]
    133990669
Ubiquitin system [BR:ssco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     133990669
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133990669
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 133990669
NCBI-ProteinID: XP_062285041
LinkDB
Position
11:13758301..13767679
AA seq 795 aa
MSNLKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLDGRSVYEEDFEGPFLDMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLGRRLLSNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHIQSTSASLSGVDLTVRVLTTGYWPTQSATPKCTIPPAPRHAFEVFRRFYLAK
HSGRQLTLQHHMGGADLNATFYGAVKKVYVTSLNDLFSSKQYENVCVYLPFYLLLQEDGS
EVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKCTFEEIQQETDIPERELVRALQS
LACGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQ
KVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREY
LARTPEDRKVYTYVA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcaccaagaaggacaccaagatgaggatacgagcctttcct
atgacaatggatgagaagtatgtgaacaacatctgggaccttctgaagaatgccatccag
gagattcagaggaagaacaacagcgggctcagctttgaggagctttacaggaacgcctac
acgatggtgctccacaagcatggagagaagctctacacaggcctgagggaggtcgtcaca
gagcacctcatcaacaaagtacgggaagatgtcctaaactctctaaataataactttctg
caaacactgaatcaggcctggaatgaccatcaaactgccatggttatgatcagagacatc
ctcatgtacatggaccgagtctatgttcagcaaaacaatgtggagaatgtgtacaacctc
ggcctcatcatattcagggaccaggtggtgcgctacggctgcattcgagaccacctacgg
cagacgttactggacatgattgcacgtgagaggaagggagaagtcgtggacaggggggca
atcagaaacgcttgccagatgctgatgattcttggcctggatggcagatctgtttatgag
gaggacttcgaaggccctttcttagatatgtcagccgaattcttccagatggagagccaa
aagttcctagcagaaaacagtgccagtgtctacattaagaaggtagaggccagaatcaat
gaggagatcgagcgagtaatgcactgcctggacaagtcgacagaggagcccattgtcaag
gtggtggaaagggagctcatttctaaacacatgaagactattgtagagatggagaactct
ggtcttgtccatatgctcaagaatggcaagacagaagacctggcatgcatgtacaagctg
ttcagtcgggtgccaaatggcctgaaaactatgtgtgagtgtatgagctcttacctgaga
gagcagggcaaggctcttgtgtcagaagaaggagagggcaagaaccctgtcgactatatc
cagggcctgctagacctcaaaacacgttttgatcgtttcctccttgagtcgttcaacaat
gacagattgttcaaacaaaccatagctggagactttgagtattttctcaatctcaactcc
cgctcaccagagtacctatccctcttcatagatgataagctcaagaagggagtcaaaggg
ttgacagaacaggaggtggagtcaatccttgacaaagcgatggtgctgttcaggttcatg
caggagaaggatgtgtttgaaaggtactacaagcagcatctgggccgcaggctgctcagc
aacaagagtgtctcagacgactcagagaagaacatgatctctaagctcaagacagaatgt
ggctgtcagttcacttcaaaactggaagggatgtttagagacatgagcatctccaacact
accatggatgagttcaggcagcatatacagtctacgtcggcatctctaagtggagtggac
ctcacagtaagagtcctcactactggttactggcctacacagtcagcaacacccaaatgc
accatcccccctgctcccagacacgcctttgaagtctttaggagattttacctcgccaaa
cacagtggtagacagctcacattgcagcaccacatgggtggagcagacctaaatgcaact
ttctatggagctgttaaaaaggtatatgtcacttctttaaatgacttgttctcttcaaag
cagtatgaaaatgtatgtgtttatcttcccttctacttacttttgcaggaagatgggtca
gaagtgggtgtgggaggcgcccaggtgacgggctctaacacccgtaagcacatactgcag
gtctccaccttccagatgaccattctcatgctcttcaacaacagagaaaagtgcactttt
gaggagatccagcaggagacagatattcctgagcgggagctggtgcgagcgttgcagtct
ttggcctgtgggaaacccacacagagagttctcaccaaagagccaaagtccaaggagata
gagaacggccatgtgtttacagtcaatgatcagtttacttccaaactgcacagagtcaaa
atacagacagttgctgctaaacaaggggaatcagatcctgaaaggaaagagacgcggcag
aaagtggatgatgacaggaagcatgagattgaggcagccattgtccgaatcatgaagtcg
aggaagaagatgcagcacaatgtcctggtggcagaggtgactcagcagctccgggctcgt
tttcttcccagtcctgtggtaatcaaaaagcgtatagaaggactaatagaaagagaatac
ttggcgaggacaccagaagatcgtaaagtgtacacctatgttgcgtaa

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