Scomber scombrus (Atlantic mackerel): 133990670
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Entry
133990670 CDS
T10651
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133990670 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133990670 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133990670 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133990670 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133990670 (cldn1)
04147 Exosome [BR:
ssco04147
]
133990670 (cldn1)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133990670 (cldn1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133990670 (cldn1)
Exosomal proteins of colorectal cancer cells
133990670 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1218
DUF202
Motif
Other DBs
NCBI-GeneID:
133990670
NCBI-ProteinID:
XP_062285043
LinkDB
All DBs
Position
11:complement(10394461..10396317)
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGLTLAFLGFIGSIASTVMVEWKASSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLPGIVQGTRGLMLCSILLCFIAILVATVGMKCTTCLAEEPQQKGKVAL
TGGIIFIISGLLALVGTSWYGNRIAKDFYNPFTPTNSRFEFGSALYVGWGAACLIIIGGG
FLCCNCSSGGSGKSPRYPPSRSAGQPDKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgctggaatacagcttcttggcctcactttggccttcttgggcttcattggc
tccatagcatccacagtcatggtggagtggaaagcttcgtcatatgcaggagacaacatc
ataacagcccaggcgatgtatgaagggctgtggaagtcctgtgtgtcacagagcacgggt
caaattcagtgtaaagtgtatgattcacttcttcaactaccagggattgtacagggcact
cgagggctgatgttgtgctccatcttgctgtgcttcattgccatcttggtggcgacggtg
ggtatgaagtgcacaacctgtttggcagaggagccacagcagaagggcaaagtggctcta
actgggggaattatcttcattatttcaggtctgcttgctctggtgggaacgtcttggtat
ggcaacagaatagcaaaggatttctataacccatttactccgaccaactcaaggtttgaa
tttggaagcgccctgtacgttggatggggagctgcctgtctcatcattataggagggggg
ttcctctgttgtaactgctccagcgggggctcaggaaaatctccacgctacccaccatcc
cgctctgcaggccagccggacaaggactacgtctag
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integrated database retrieval system
