Scomber scombrus (Atlantic mackerel): 133990692
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Entry
133990692 CDS
T10651
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133990692
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
133990692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_6
Homeodomain
zf-C2H2_15
COG3_N
Motif
Other DBs
NCBI-GeneID:
133990692
NCBI-ProteinID:
XP_062285075
LinkDB
All DBs
Position
11:22289601..22361485
Genome browser
AA seq
1243 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTEFNNGLEASSDSDDEDKLHIVEEDSLQEPEVAAADGTKP
QDSHDDATTVLPFNGSWNGVKEECVSEEEEEGEGVEGEEEEEEEVVKDALVEEILQQGDT
AVIYPEAPEDEQSPAETGGADENGTPDSFSALHTCPYCSRGYKRNASLKEHIKYRHETSE
DNYSCSHCSYTFTYRSQLERHMSHHRGTREQVSQTTGGTGGTRKFKCTECSKAFKYKHHL
KEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVSAAPTNGVTRTSIKIKSPPTTA
TTPVMIAPARVILKEKTESKPLQEQLPVTQIKSEPVEYECKPATAAPATSTGANGVVNGG
TATPAAVHTATLPQGVAMVVPTVGLMSPISINLNDLQNVLKVAMDGNVLRQVMGTANRVV
TQGKQGIVVQQPQQQIISLPAFVDHDGTTKIIINYSISPAAATTATTHAAPFIVKNNPLP
LPTVTSAAAPTPTKTDRPQTPEVADLTIVKAEPEAEPVTVMETEASTQTEKGTVKTSRTS
HTEKAQMPKPNSSSTCLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAG
VTLEEPPVEDLVSLLKTYFASNANPSQEELRKISESVSIPMEVIRKWFVKMNSGKNAGKY
RNEAAVYKKTEITNSNSEDASNQNGETMEETKLEASAKVSTESGSASPSSPLSLNTGDLI
IIKSEPEDPEALDSQAEPLDLSLPKHLAALATTRTTPPIKQQEHPLNLTCLRKEQLEGQT
IFVNTPQTGRPVNIVTAAQLPTLVAIASQGTVGCLSAINTTTKRTILIPQLTYTYATTAG
STTEAKTVVLNGHKPEKRPDSSSDGNSTVEEQHELAIIKKRRLENGVYPCDLCSKVFQKG
SSLLRHKYEHTGKRPHECNICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYS
QHMNHRYSYCKKDGISAGSGSGPGLFQSELSSPGAGPQSDSRTTTPPSQLDSDERESEEE
EDDDDEAMCMDDIRVVQVDDGECEIYEGNFEEFAGEEEVVAEDELTGGGRGEEEEEEEEE
EEEEEEEEEEEGEAAEEAKADEEEVVSEVMKVKLVDDQREEEEEMEEITEEMEEITEDME
EITEEKEEITEEMEEITEEMEEITEEMEEITEEKEEITEEKEEITEEKEEITEEKEEKTE
EKEDEASEETEETADCEADTDKSIREDAGGGGEPTEEAVTDAK
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggagcagtgtg
acagaattcaacaatggcttggaggccagctcagactctgatgacgaggacaagctacac
attgtggaggaggacagtctgcaggagcccgaggtcgccgccgctgatgggaccaaaccg
caggacagccatgacgacgccacaacagtattacccttcaacggctcctggaacggagtg
aaggaggagtgcgtgtcagaagaagaagaagaaggagaaggagtagagggagaagaagaa
gaagaggaggaggtggtgaaggatgccctagtagaggagattctccagcagggagacaca
gccgtcatctaccccgaagctcccgaggacgagcagagtccagcggagacaggaggcgct
gatgaaaacggcaccccagattccttctctgcgttgcacacttgcccctactgctcccgg
ggctacaagcgcaacgcctcgctgaaggagcacatcaagtatcgccacgagacaagcgag
gacaactacagctgctcgcactgcagctacaccttcacgtaccgctcgcagctggagagg
cacatgagccaccacaggggcaccagggagcaggtttcccagacgacaggaggaacaggt
ggaacccgaaaattcaagtgtactgaatgttccaaggccttcaaatacaagcaccacctg
aaggagcacctgcgcattcatagcggtgagaaaccatacgaatgctcaaactgcaagaag
cgattctcccactcaggctcctacagctctcacatcagtagtaagaagtgtgtgagtgcg
gcacccacgaacggcgtcactcggacatcgatcaagatcaagtcccctcccaccacggcg
accacgcctgtgatgatcgctccagctcgcgtgatattgaaagagaagactgaaagcaaa
ccccttcaagagcagctccccgtcacccagatcaaatctgaacctgtggaatacgagtgc
aagcccgcgacggcagcaccggcaacgtcaactggtgccaacggagtggtaaacggaggg
acggcgacacctgctgcggtccacactgcgacactgcctcagggcgtggcaatggtcgta
cccacagtcggcctgatgtcacccatcagtatcaatttgaatgacttgcagaatgtgttg
aaggtggccatggatggaaatgtgctcaggcaggtgatgggtacagccaacagggtggtg
acgcaggggaagcaaggaatcgtagtccagcagccccagcagcagatcatcagcctgccg
gccttcgtggatcacgacggcaccacaaagatcatcatcaactacagcatcagccctgca
gccgctaccactgccactacccacgctgcaccttttatcgttaaaaacaatcctcttccc
cttcctacggttaccagtgctgcagcccccacccccaccaaaacagatagaccccaaacc
cctgaggtggctgacctcaccattgtcaaggcagagccagaagcagaacccgtcacggtg
atggagacggaggcatccacacaaacagaaaaaggaactgttaagacttcaaggacttca
cacactgaaaaagctcagatgccaaaacccaacagctccagtacgtgtttactatgtgac
gactgtcccgacaacctggaggcgttgcacctgctccagcaccgcaaagcagccaacggg
gaggccgtcgactccgccgcactcgacccctcattcgccgctctgctaagcgaggcgggg
gtgacgctggaagaaccgcctgtggaagacctcgtctcactcctcaagacatattttgcc
tccaacgccaaccccagccaggaagagctgagaaagatctcggagtctgtcagtattcct
atggaagtgatcaggaagtggtttgttaagatgaactctgggaaaaatgccgggaaatat
cgcaatgaagcagcagtttacaaaaagactgaaatcacaaattccaattcagaggatgct
tcaaatcagaatggagagacgatggaggaaaccaaactagaggcttctgccaaagtctca
acagaatctggaagtgcttccccttcatcgccactaagcctcaacaccggtgacctcatc
atcattaaaagcgaaccagaagacccagaagctctggactcccaggcagagcccctggac
ctctcccttcctaaacaccttgcagcattggcaactacaaggacaacgcctcccatcaaa
caacaggaacaccctctgaacctgacctgcctgaggaaggagcagctcgagggtcaaacc
atcttcgtgaacacacctcagaccggaagacctgtcaacatcgtcaccgccgcacagctg
cccaccctggtggccatcgctagtcagggcacggtgggctgtctcagcgccatcaacacc
acaacgaagcgaaccatcctcatcccccagctcacttacacctacgctactacggccggc
agcaccactgaagcaaagactgttgtacttaacggacataagccggagaagagaccggac
agcagctctgatggcaattccacggtggaggagcagcacgagttggctattatcaagaag
cggcggctggaaaacggcgtttacccctgtgatctttgctctaaggtcttccagaagggc
agctccctgctcaggcacaaatacgaacacacaggaaaacgcccccacgagtgcaacatc
tgcaagaaggccttcaaacacaagcatcacctgatcgaacactcgaggctgcactcgggt
gaaaaaccgtaccagtgcgacaagtgcgggaagcgtttctctcactcaggctcttactcc
cagcacatgaaccaccgttactcctactgcaagaaggacgggattagcgcgggctccggc
tcgggtcccggccttttccagtctgagctcagcagccccggagccggaccgcagtcggac
agccggaccacgaccccgccctcccaactggactcagacgagagggagagtgaggaggaa
gaggacgacgacgacgaggccatgtgcatggacgacatccgggtcgtgcaggtggacgac
ggcgagtgtgagatctacgagggtaattttgaggaattcgccggcgaggaagaggtggtg
gcagaggatgagctgacaggaggaggacgaggagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaaggagaggcagcagaggaagcgaaggcg
gatgaggaagaggtcgtttctgaggtgatgaaagtcaagctggtggacgaccagcgagag
gaagaggaagagatggaggaaataactgaagagatggaggaaataaccgaagacatggag
gaaataactgaagaaaaggaggaaataaccgaagagatggaggaaataaccgaagagatg
gaggaaataactgaagaaatggaggaaataaccgaagaaaaggaggaaataacagaagaa
aaggaggaaataaccgaagaaaaggaggaaataactgaagaaaaggaggaaaaaaccgaa
gaaaaggaggacgaggcaagtgaagagacggaggagacggcagactgtgaagcagatacg
gacaaaagcatcagggaggacgcaggaggcggcggcgaacccacagaggaagcggtgaca
gacgccaaataa
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integrated database retrieval system
