Scomber scombrus (Atlantic mackerel): 133990715
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Entry
133990715 CDS
T10651
Symbol
gad3
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00250
Alanine, aspartate and glutamate metabolism
ssco00410
beta-Alanine metabolism
ssco00430
Taurine and hypotaurine metabolism
ssco00650
Butanoate metabolism
ssco01100
Metabolic pathways
Module
ssco_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
133990715 (gad3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
133990715 (gad3)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
133990715 (gad3)
00430 Taurine and hypotaurine metabolism
133990715 (gad3)
Enzymes [BR:
ssco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
133990715 (gad3)
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
133990715
NCBI-ProteinID:
XP_062285098
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Position
11:873084..890360
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AA seq
560 aa
AA seq
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MMTTKPLNVVNMSKVVVIYSPRTFILLNMEQERITDKSARRDKQQEDSTAVRERKQTPAD
FSSISSKDLLPASGGEEMTKGFLQELVNILLDYICKSSQRSSKVLDFHHPHQLKEGLEGF
SLDLPEQPETLEQILVDCRDTLKYGVNTGHPRFFNQLSSGLDVIGVAGEWLTSTANTNMF
TYEVSPVFILMEEVLLRKMQSIVGWSDDEGDGIFCPGGTISNLYSILLARFYFFPEVKTR
GMSHLPQLVLFSSEHSHYSVKKSAAALGMGSDNVIMVKCDERGKMIPAELESSIVAAEER
GLVPFYVNATAGTTVYGAFDPLNDIADICHRHTLWMHVDAAWGGGLLMSHRHRMKLQGIE
RAWSVTWNPHKMMGSPLQCSAILVKKRGLLQECNELGAEYLFQTDKHYDVSYDTGDKSIQ
CGRHVDVFKLWLMWKAKGSEGFGSQVNKCLENAEYLYDRLQRRTDFELVFKNKPEHSNVC
FWYIPPSLRSLPPGADRDTRLHQVAPRIKSRMMEKGSVLIGYQPLATKVNFFRCVFSNPA
TQQEDIDFLLEEISRLGSDL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccaaaccccttaatgtagttaacatgagcaaagtagtggtcatatattca
cccagaactttcatcttacttaacatggagcaagaacgaatcactgataaatcagccagg
agggacaaacagcaggaagactcaacagcagtcagagaaagaaaacagacacctgctgac
ttcagcagtatctccagcaaagacctgctcccagcttcaggaggggaggagatgaccaag
gggtttcttcaggagctggttaacatcttgttggattacatctgcaagtcaagtcagagg
agttccaaggttctggatttccaccatcctcaccagctcaaggagggactggagggcttc
agtctggacctgcctgaacaacctgaaactctggagcaaatactggtggactgtagagat
acactcaagtatggtgtcaatacaggccatccccgcttcttcaatcagctatcctcaggt
ctggatgtgattggtgtagccggtgagtggctgacctctacagccaacactaacatgttt
acatatgaggtgtctcctgtcttcatcctcatggaagaggttctactgaggaagatgcaa
agcattgtgggatggtctgatgatgagggggatggaatcttctgtccaggaggtacaata
tccaacctgtacagcatcctgttggccagattttacttctttccagaggtgaagactaga
gggatgagccatctgcctcagctggtcctcttctcttcagaacatagtcactattcagta
aagaaatctgctgcagcgctggggatgggcagtgacaatgtaataatggtgaaatgtgat
gaaagaggtaaaatgatacctgctgaacttgaatcctccattgttgcagctgaagaaagg
ggcttggttccattctatgtgaatgcgacagcaggcaccacagtgtatggagcctttgac
cctctcaatgacatcgcagacatctgtcatagacacacactgtggatgcatgttgatgca
gcttggggtggaggcctgctgatgtcacacagacacaggatgaagctacagggcattgaa
cgagcttggtctgtaacatggaatcctcacaagatgatgggcagtcctctgcagtgctct
gccatactggtcaagaagagaggtctcttacaagagtgtaatgagttgggggctgagtac
cttttccagacagacaaacattatgatgtgagctatgatactggagataagagcatccaa
tgtggccgacatgttgatgtctttaaactttggctgatgtggaaagcaaagggctcagag
ggatttggatctcaagtcaacaaatgcttagagaatgctgagtatctgtatgatcgactg
cagaggaggacagactttgaacttgtcttcaaaaacaaaccggagcacagcaacgtatgt
ttctggtacattcctcccagtctgagaagcctgccacctggagctgacagagacacacga
ctccatcaggtggcccctcggatcaaaagcaggatgatggagaagggctctgttctgatt
ggctatcagcctttagcaactaaagtcaatttcttcaggtgtgtgttctccaaccctgct
acacagcaagaggacatcgacttcctgctggaggagatttcccggctgggtagtgaccta
tga
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