Scomber scombrus (Atlantic mackerel): 133990744
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Entry
133990744 CDS
T10651
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
133990744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133990744
NCBI-ProteinID:
XP_062285130
LinkDB
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Position
11:complement(7225123..7323706)
Genome browser
AA seq
1692 aa
AA seq
DB search
MASKETTAAGFVNVSREITESIRKVLDKQAIKFVRAIKQDTRSGKSEDRILVLATWRLYL
FAVKVPTKVEVTFNFLEIRAMNTYPEHQVVIDTDKTTFSLRLQTQDQLDHTVNHINYALS
RVFNNSIYAPPICRAEGDLTDGSHKFSPNSESSLDTQKTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVIVASIAYNTWFTKLYCKDLRIGSEVVD
QVLHTVSKSNSLEELTLENAGLKSDFPQKMASALSENPASVIHSLNLAHNTLDNQGVSNL
IQQVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYSNSLLHLDLSKNPGVLSGEDA
TNLYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCADLSYLNLSKNSFSHRKARDSLP
TFRQFFSSAFSLTHVSLACMKVPPDSLRALFLGLSNNPHITDLHLDISSCELRSAGAGVI
QELFPRVSCVGTLDISDNGLDADLLAVIPAFSRHPSLKHLMIGKNFNIKGRVLEEILQKV
VHLVQEEECALQSLSLADSRLRQRGTVLVNALGSNACLRKVDLSGNALEDSGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARALEHNFTLQYMPLPLSDVTQAYRSAPEKIDQALT
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVSVLKGSEEGEEVQ
TAKQILKEARNSRALYPSLCELAHVLSVDGPVKQRLDNLAGELAKAADKELQVVVDSMVS
LCRELCPMSSSAAERLSPPLSSISEQVSIPRSAIRNALMERAAEDINRALEEVKLSVVSY
LTNSIVDQILQELYTTHKTLVLLRQVSQAKRWDDVGTGRRTIRQSRIVESLEFPDEDLGI
NLGIDTMAIKKRSSRTRRIRPVSTRLSLCDEPTSSPTPSAPPHSASLSHSASWECLSTLP
TNGSPLRHVTHVRPRPPRRHRAGHLPPESHCSENGAVNMLEDGLPDFYSKRVLPDSQLSS
LHQGQSLRRKKRRSVLSIFSGFRKNRNSTISNQDSDSASENVYSMIQHTKDGGRPDSTVP
GANGTMSSPRPTQGVPVHGIRAASPPCLNQRQSTDLVSMVYSCIGAEIEDSDTSSTCDFK
AVDQDTDGSTTISDAPTDTRTNGHVVSSKQQADRQMETCRQERIVPLIDARPELEEDTQS
GVLAPSGPRPDPPPQSTKPSLSVMRQRHLQESLEEAGRLELEEDQSERKREEKQRTRGPE
GQRPLIPNKPSLDLSKDRISPEKVKASPETSPVSPGEEAATDQRGMPATESIIYEEETTE
RKSPAASPPDPAVSQDEEGGRNGFPAASHSRKSNSFDIGMERDSPYDLERSSDRRFSVKK
PCFPQYRNRSLDCPAGTRSHQLMVNGGLFPGGVHCAQETPCTVLSLTVTMPAIVNLLFNV
VSTNTTISFAVVLPMVSLVSLVVGVGGHLLLWLVLMRNPRSRSKPSSVLLLNLSLADLGA
LLTLPCVLLSASFQNWQLGGGTCVFLGFMTSITVGVEIFSLAALSVLRYRIVAPRMRLLA
SLTQVLCTVVAIWIISVTMALPKVTYINFDGGCTWSVGRHEWLSFLVPAFLVYYVGPLLC
IAINCGLIISHLHGCRGTLAADRRNKKATALLIASTLVFAISWSVESISIDPVLIDLATW
GVEMDVNLIPQK
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaggagaccacagctgcgggcttcgtcaacgtcagcagggaaatcacagag
agcatcaggaaggtgctagacaagcaggccattaaatttgtgcgagccatcaaacaggac
accaggagtggcaaatcagaggacaggattctggtcctggcaacatggagactgtatctc
tttgctgtcaaagtgcccaccaaggtggaggtcacattcaacttcttggaaatcagagca
atgaatacttatcccgagcatcaggttgtcatcgatacagacaagactaccttctccctg
agactgcagacccaggaccagttagatcacacggtcaaccacatcaactatgccctctcc
cgagtcttcaacaactccatttatgctcctcctatctgtcgagcagaaggtgacttaact
gatggaagtcacaagttttcaccaaactcagagtcgtcattagacacccagaaaacctgc
ggtggtttttcggaaacctacgcagctctgtgtgactacaatggaataggctgcaaagaa
gaagtgcagtgggatgttgacaccatctaccacagtcaggacaacagagagttcaactta
ctggatttcagccatcttgacagcagggacttggcagtgatcgtggcatccattgcgtac
aacacctggttcaccaagctgtactgcaaagacctgcgcattgggtcggaggtggtggac
caggtcctgcacacagtcagcaagtccaacagtctggaggagctcactctggagaatgca
ggactcaaatcggattttccgcagaagatggcgtcggcactgtcagagaacccggcgtcc
gtgattcactccctcaacctggctcacaacacgttagacaaccaaggagtgtccaacctg
attcaacaagtgtgtcgcctcaacaaaggccttcgcctcctcaatctctccaagacctcc
ctgtcctctaagggtgtggtttctctatcccaggcgttgtgttcaagtgacgactactcc
aattctctgctgcatctggacctcagtaaaaaccctggggttctgtctggagaggatgct
acaaacctgtacctgttcctcgcccagcccaactgcctggtccatttggatctatctgga
acagactgtaccgtggactcgttgttcggggccttgctgcggggctgctgcgctgacctc
tcctacctgaacctgtccaagaactccttctcccacaggaaagcgagagattctctgcca
actttccgccagttcttcagctccgcattcagcctgacccatgtcagcctggcctgtatg
aaggtccctcctgattcactgagggctctgttccttggtctgtccaataaccctcatatc
accgatttacatctggacatcagcagctgtgagctgaggtcagcaggtgccggcgtgatt
caggagctgtttcctcgggtgtcatgtgtggggactttagacatctctgacaatggtttg
gatgctgacttgctggctgtcattccagctttctccaggcacccctccctcaaacacctg
atgattggcaagaacttcaacatcaagggcagggtgttggaggaaattctgcagaaagta
gttcatttggtgcaagaggaagagtgtgccctgcagtctctctccctggctgactcgagg
cttcgccagcggggcacggtgctggtcaacgccctgggctccaacgcctgcctacgaaag
gtggacctgagtggcaacgccctggaggattccggggccaagatgctcagcaaggccctg
cagataaatacaacactcaggagtgtgacgtgggaccgcaacaacaccacggccacgggc
ttccaagacgtggcgagagcgctggagcacaactttaccctccagtacatgcccctcccc
ctcagcgatgtcacccaggcgtatcgcagcgccccagagaagatcgaccaagccctgacc
aagatccagcgtgccctgcttaggaataaccagactcagcgtttctctcagaagcaggct
ctcaggctgcatcaaggcctcgtcaccagcaccgccgaacaggtgatggagcgtctgtgt
gtgcgggtgcagcagcaggtgagtgtccttaaaggcagtgaggaaggagaggaggtgcag
acggcaaaacaaattctcaaagaggccaggaactcgagagctttgtatccgtccctgtgt
gagctggcccacgtgttgtcagtggacggcccggtcaaacagcgactggacaatctagct
ggggaactggcgaaagctgccgacaaggaactgcaggtggtggtggactccatggtatct
ctgtgccgtgagttgtgtccgatgtccagctcagccgcagagagactcagcccgcccctg
tcgtccatatccgagcaagtttcgatccctcgctcggccatccgcaacgccctgatggag
agagcagctgaggatatcaacagagccctggaggaggtgaagttgtctgttgtctcctat
ctaaccaactccatcgtggatcagattctacaagagctctacaccactcataaaacgctg
gtactgctgcggcaggtgtctcaggcgaagcgctgggatgacgtcgggacgggcagacgc
acaatcagacagtccagaatagtcgagtcgctggaattccccgatgaagacctgggcatc
aatctgggaatagacaccatggctattaagaagcggagctccagaaccaggagaattcgt
cccgtctccaccagactgagtctatgtgacgagcccacttcttctcccaccccctccgct
ccaccgcactccgcctctctctcccactcggcatcatgggagtgtctttccacccttccc
accaacggctctcccttacgccacgttacccacgtcaggccacgccctccgcggagacac
agagcggggcaccttcctccagaatctcactgctcagagaatggagcagtcaacatgctg
gaggatggactacctgatttctacagcaagagagttctccctgacagtcagctgtcatcc
ctccatcagggccagtcactgaggaggaagaaaagacgcagcgtgttgtccattttctcc
ggcttccgcaagaaccgcaactccaccatctccaaccaggactctgacagcgcctcagag
aacgtctactccatgattcagcacactaaggacggcggacggccagatagcactgttcct
ggagcaaacgggaccatgtcttcgcccaggcccacgcagggtgtacctgtgcacggcata
agggccgccagccccccctgcctcaaccaacgacagtccacagacctggtcagcatggtg
tacagctgcatcggggctgagatcgaggactcagacaccagcagcacctgtgacttcaaa
gcggtggaccaagacaccgacgggtcgaccaccatctcagatgcccccacagatacccgg
actaacggccacgtggtgtcctccaaacaacaggcggacagacagatggagacgtgcagg
caggagaggatcgtaccactgatagacgcacggcccgagctggaggaggacacgcagagt
ggagtcttggctccctctgggccacgaccagatcctccaccacagagcaccaagcccagt
ctgtctgtcatgaggcagagacacctgcaggagagtttagaagaggcagggaggctggaa
ttagaagaagaccagagtgaaagaaagcgtgaagagaagcagagaacaagagggccagag
ggacaacgtcctcttattcccaataagcccagtctagacctctccaaagacaggatctct
ccggaaaaagtcaaggcatctcccgaaacctcgcccgtcagtccaggagaggaagcagcc
actgatcagaggggcatgcctgctactgagtccatcatttatgaggaggagaccacagag
aggaaaagtccagcagcatctcctccagatcctgctgtcagtcaagatgaggaaggaggc
cgtaatggatttccagcagcatcacattccaggaagtccaactcatttgacataggcatg
gaacgggacagcccctacgatctggagagatcttcagatcgcagattctctgtgaaaaag
ccctgtttcccccagtacagaaacagatctctggactgccctgccgggaccaggtcacat
cagctgatggtgaacggagggcttttccctggaggtgttcactgcgcacaggaaacacct
tgtactgtactgagtctcacggtcaccatgcctgccatagtcaacctccttttcaacgtt
gtctccaccaacaccaccatctcctttgctgtggtgctgcccatggtcagtctagtctct
cttgtggtgggtgttgggggtcacctcctgctgtggctggtgctgatgaggaacccccga
agccgctccaagccaagctccgtcctgctcctcaacctcagcctggctgacctgggcgcc
ctgctcaccttgccctgtgtcctcctaagtgccagtttccagaactggcagctcggaggt
gggacctgcgtctttctggggttcatgacttccataacagtgggagtggaaatcttcagt
ctggcagctttgtcagtgctgaggtatcgtatcgttgcaccacggatgagactacttgct
agtctgacgcaagtgttatgcactgtagtagccatttggattatctcagtaaccatggcg
ttaccaaaggtcacctacatcaactttgatggcggttgtacatggtccgtaggccgacac
gagtggctgtctttcctggttcctgccttcctggtttattatgtgggccctctcctttgt
attgccatcaattgcggcctcatcatctcccatctccatggctgcaggggtactctggct
gctgaccggcgcaacaaaaaagctactgccctgctgattgcctcaacactggtttttgct
atcagctggtcggtggaatccatctcaattgatccagttttgattgatctggcaacctgg
ggtgttgaaatggacgtcaacctgatcccacagaaatga
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integrated database retrieval system
