Scomber scombrus (Atlantic mackerel): 133990945
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Entry
133990945 CDS
T10651
Symbol
toe1
Name
(RefSeq) target of EGR1 protein 1 isoform X1
KO
K13202
target of EGR1 protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133990945 (toe1)
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133990945 (toe1)
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Ortholog
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GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf-CCCH_9
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
133990945
NCBI-ProteinID:
XP_062285362
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Position
11:6527509..6534519
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AA seq
523 aa
AA seq
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MASSLVVPVINVHKDNFKELWPAMVIAIKTSSFVALDTELSGLGNRKSLLAESICFRSIE
DRFKAICHAARSRSILSLGIACYKKLDNKPADTYMVQVYNLTLLCSEEYIIEPQSVQFLV
QHGFDFNKQYAQGIPYCKGNNKGGSDNHGVHIRALFTELLRARKPLVLHNGLIDIAFLYQ
SFYAHLPERLATFTADLSEMFPAGIYDTKYVTEFELRLTASYLEYAYKKCKLDNGRSVTS
GGVGPHVHVEFCQYVGQMSSYVDYRVCPDVVSAEGKTDICQRFSAFGWCLNGSQCPLSHD
TDLIILQDEKGKQDKKRKRKRNREKRSAGEVAEDSSIFDNAPENKIPHMEVDPEETGDGQ
KETTAEPCEEGKQNEGENMKTESEGNGVCEHNTDSTNSATTAVINDDTKTDNGVENTAGK
MMIEKCSDPTTKTESEKKADSGTHRAGFDAFMTAYIFAYSCSNFKKDGADDSAEEKEQTW
LPTALNKVYLSGKAAPLNVVKSTFSKSSKAHMQKMEMVWGKGV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcactggtagttcctgtcattaatgttcataaagataatttcaaagagctt
tggcctgctatggttatagctattaaaacgtcctccttcgttgcacttgacacggagctg
agtggtcttgggaacaggaaatccttgctggcagagtctatatgtttcaggtctatagag
gacagatttaaagctatatgccatgcagctcgctctcgctccatcctctctctgggaatc
gcctgctacaagaaactggacaacaagccggcagacacgtacatggtccaggtgtacaac
ctcaccctgctgtgttcagaggagtacatcatagagcctcagtcagtccagtttctggta
cagcacggatttgatttcaacaagcagtacgcccaaggaatcccttactgcaagggcaac
aacaagggaggatcagacaaccacggtgtccacatccgggcgttgttcaccgaactgctg
cgggccaggaaacccctggtgctccacaacggcctcatcgacatcgccttcctataccag
agtttttacgctcatttgcccgagcgcttggccaccttcacagccgacctgtctgagatg
tttcctgccggcatctacgataccaaatacgtcactgaatttgagctccggcttactgcc
tcctatctggagtatgcctacaagaaatgtaagctggataacggtcgcagtgtgacctct
ggaggggtcggacctcacgttcatgtggagttctgtcagtatgtcggtcagatgtccagc
tatgtggactacagggtctgtccagatgtggtgtctgctgagggaaagactgacatctgc
cagcgcttctctgcatttggttggtgtcttaatggcagtcagtgtcctctgtcccacgac
actgacctcatcatcctccaagatgagaaaggcaagcaggacaagaagagaaagagaaag
agaaaccgagagaagagatctgcgggagaggtagcggaggactcctccatctttgacaac
gcccccgaaaacaaaataccacacatggaagtggatccagaagaaacaggagacggacag
aaagagacgaccgctgagccgtgtgaggaggggaaacagaatgaaggggaaaacatgaaa
acagaaagcgaggggaacggagtgtgtgagcacaacacagactccacaaactctgcaacg
accgccgtaataaatgacgacacaaaaacagacaacggtgtagaaaacacagcaggaaag
atgatgatagaaaagtgtagcgatcccaccactaagactgagagtgagaagaaggccgac
tcagggacgcaccgggccggttttgacgctttcatgacagcatacatcttcgcctactcg
tgcagcaacttcaagaaggacggagcggatgatagtgcagaggagaaggagcagacgtgg
ctcccgaccgctctcaataaggtttacctcagcggcaaggcggctcctctcaacgtggtt
aaaagcaccttctccaagtcatccaaggcccacatgcagaagatggagatggtgtggggg
aagggagtgtag
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