Scomber scombrus (Atlantic mackerel): 133990975
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Entry
133990975 CDS
T10651
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133990975 (kcnn1a)
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
133990975 (kcnn1a)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DUF6775
Motif
Other DBs
NCBI-GeneID:
133990975
NCBI-ProteinID:
XP_062285400
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Position
11:complement(11128676..11173823)
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AA seq
553 aa
AA seq
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MNTCKINGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKA
SNESLVREGSGHGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTE
TELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYE
RIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRV
MLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVC
ERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAV
VARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQ
RKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLED
KLDSVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASERSERSERSWTSTARRRR
SPSTAPHTSSDSG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcaagattaatggcggagtggtgcgaccactagtgggcagtctggcgtcc
tcgtcgcgccgcaaccttgcggagctcgactcggagacgcagcccttgcagacgctgcac
agctctggcctggaggtggtggtgtccaagggcaacggcggcgaagatcctagcaaggcg
tccaacgagagtttggtcagggagggcagcgggcatggcggaggcagggcgccgcagaag
aagaacagggacattggctacaagcttggccaccggagggcactgtttgagaagcggaag
cggctcagcgactacgcactcatcttcgggatgtttgggattgttgtcatggtgacagag
acggaactgtcatggggggtttacactaaggaatcttcatactcatttgcactgaaatgc
cttatcagcctttccactgttatattgcttggtcttataataatgtaccatgcccgggaa
atccagttatttatggtggacaatggtgcggacgattggaggatagccatgacgtatgag
cggatcttcttcatcgtgctggagctgctggtgtgtgccatccatcccatcccgggccag
tacgtctttacctggacggcgcggctggcctttacatacacgccgtcggtggccgatgcc
gacgtggacatcatcctctccatccccatgttcctgagactctacctgatcggcagggtc
atgttacttcacagcaagctattcacggacgcttcctctcgcagcattggcgccctcaac
aagatcaacttcaacacacgctttgtcatgaagaccctcatgaccatctgtccaggaact
gttctgctggtgttcagtatatcctcctggatcattgctgcatggactgtgcgcgtctgt
gagaggtatcacgacaaacaggaagtcaccagtaactttctgggagccatgtggctcatc
tcgattaccttcctctccattggctacggggacatggtaccacacacgtactgtgggaaa
ggcgtgtgtctgcttacagggattatgggagctggctgcactgcgctggtggttgcagtg
gtagccaggaagctggagctgaccaaggctgagaagcatgtccacaacttcatgatggac
acacaactctgcaaacgagtgaagaacacagctgccaatgtactcagggaaacatggctc
atctacaaacacaccaagttggtcaagaagatagatcatgccaaggttcggaaacaccag
cgcaagtttctccaagccattcaccaactgcgcagtgtgaagatggaacagaggaaactc
aatgatcaggccaatactttggtggacctggcaaagacccagaatgtgatgtatgacctg
gtgtcagagctgcaggagcgcagtgaggagctggacaagcgcatcggcacattggaggac
aagctggactcggtgacgggcagcctgcaggcgctgccctgcctcatctcccaagccata
acccagcagcagcaggacttcctggacggctttgttcaccgctttcggcctgcctcacta
gcctcagagcgctctgaacgctctgagcgatcctggacttccaccgctcgcaggcggcgc
tcaccctccacagctccacacacctcctctgatagcggataa
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