Scomber scombrus (Atlantic mackerel): 133991022
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Entry
133991022 CDS
T10651
Symbol
zgc:66427
Name
(RefSeq) E3 ubiquitin-protein ligase ZNRF1
KO
K10694
E3 ubiquitin-protein ligase ZNRF1/2 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133991022 (zgc:66427)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133991022 (zgc:66427)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133991022 (zgc:66427)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
133991022
NCBI-ProteinID:
XP_062285456
LinkDB
All DBs
Position
11:24883816..24892695
Genome browser
AA seq
261 aa
AA seq
DB search
MGTRASRLQEEPAPSAFGKDGTKRDSYRRSRCTRPTSLMVDFSGSFEDTEANRSRSEEGS
DSDLGQHGASADGSPADHHSIPSGISQPSPTDDNNSEGKPEEDGSVSPEAAVDAGHQPGV
ETGRTPHRTFSERLPGNRHSSSRNVGARSARVRGSHQRPVSEAWIGLYRVNNRHGNIRCP
FCSKPFPGGRIEDHLLSCLTSPPLPYNADVLSKDSGECSICLEDLVQGETIARLACLCVY
HKSCIDSWSKVKPCCPEHPFD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcgagccagccgcctacaggaagagccggctccctccgctttcggaaaagat
ggcaccaagcgggattcataccgacgctcccgctgtacaagacccaccagcctcatggtc
gacttctccggcagcttcgaggacaccgaggccaaccggagccgctccgaggaaggcagc
gactcggacctcgggcagcatggggcgagtgcagacggaagcccagccgaccaccacagc
atcccctccggcatcagccagccgtcacctaccgacgacaacaacagcgaggggaagccc
gaggaggacggtagcgtgagcccggaggctgccgtcgacgctgggcaccagcccggagtg
gagacaggccgcacgccacaccgcactttttccgagaggctgcccgggaatcggcactct
tcctcccgcaacgtcggggcgagatccgcccgtgtccgaggctcccaccagcggccggtg
tccgaggcgtggatcggcctctaccgtgtcaacaaccgtcatggcaatatccgctgtcct
ttctgctcgaagcctttcccggggggtcggatcgaggatcacctgttgagctgtctcaca
tctcctccactaccttacaatgcggatgtgctcagtaaagacagcggcgagtgctccatc
tgtttggaggatctggtgcagggagagaccatcgccaggctggcttgcctctgcgtctac
cataagagctgcattgattcctggtccaaggtgaagccctgctgccctgaacaccccttc
gattga
DBGET
integrated database retrieval system
