Scomber scombrus (Atlantic mackerel): 133991076
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Entry
133991076 CDS
T10651
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00250
Alanine, aspartate and glutamate metabolism
ssco00410
beta-Alanine metabolism
ssco00430
Taurine and hypotaurine metabolism
ssco00650
Butanoate metabolism
ssco01100
Metabolic pathways
Module
ssco_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
133991076
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
133991076
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
133991076
00430 Taurine and hypotaurine metabolism
133991076
Enzymes [BR:
ssco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
133991076
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GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
133991076
NCBI-ProteinID:
XP_062285522
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Position
11:8344877..8357430
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AA seq
583 aa
AA seq
DB search
MATSEPRASGGDQDPNSDNLRPPSTTNEYAWMHGCTRKLGMKICGFLQKNNSLEEKGRLA
GQKNLLSCDNSDRDARFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVDILTNYVKKT
FDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFFNQL
SCGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPDGEGDGLFSPG
GAISNMYSVMIARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGSENVVLL
STDERGRVIPADLEAKIIETKQKGYVPLFVNATGGSTVYGAFDPINEIADICEKYNLWLH
VDGAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVPLQCSAILVREKGIMAGCNSMC
AGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLSQYLY
NKIKNREGYEMVFNGVPQHTNVCFWYLPPSLRGMPDGDERREKLHRVAPKIKAMMMESGT
TMVGYQPQGNKVNFFRMVVSNPAATQSDIDFLIDEIERLGNDL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgagagccagcggcggggaccaggaccccaactcagacaattta
agacctccgtccacaaccaacgaatatgcgtggatgcacggatgcacacggaaactgggg
atgaagatttgtgggttcctgcagaagaacaacagtctggaggagaaggggaggctcgct
ggccagaagaacctgctctcgtgcgacaacagcgacagggacgcgcgcttccgtcgcacc
gagaccgacttctccaacctgttcgccagagacttgctgccagccaaaaatggagaagaa
ccgaccatgcagtttttgctggaggtggtcgacatcctcactaactacgtcaagaagact
tttgaccgctccaccaaggtgctggacttccaccaccctcaccagctgctggagggcatg
gagggcttcaacctggagctgtctgaccagcccgagtccctggagcagatcctggtggac
tgcagggacacgctcaaatatggcgtccggacaggtcatccacgcttctttaaccagttg
tcttgtggtctggacatcatcggtctggcaggagagtggctcacctccactgctaacacc
aacatgttcacctatgagatcgctccagtgtttgtgttgatggagcagctgaccctgaag
aaaatgagagagatgattggatggcccgacggagagggagatggtctcttttcaccaggc
ggcgctatctccaacatgtacagtgtgatgatcgcacgttacaagtatttccctgaggtc
aagaccaagggcatgtctgctgctccccgcctcgtccttttcacatccgaacatagccac
tactccataaagaaggctggagctgctctgggctttggtagtgaaaatgtggttctgcta
agcacagatgagagggggagagtcattcctgcagatctggaggccaagatcattgaaact
aaacagaagggttacgtgccgttgtttgtgaacgccacaggaggctcaactgtctacggt
gcattcgaccccatcaatgagattgctgacatctgtgagaagtacaacttgtggcttcac
gttgatggagcgtggggtggtggactgctgatgtccaggaagcatcgccataagctgaat
ggcatcgagagggccaactcagtcacatggaaccctcacaagatgatgggcgtgcctcta
cagtgctctgcaatcctggtcagagagaagggaatcatggcaggatgtaactccatgtgt
gccggctacctcttccaaccagacaaacagtacgatgtcacctacgacactggggacaaa
gccatccagtgtggccgtcacgtcgacatctttaagttctggctcatgtggaaggccaag
ggcaccatcgggtttgagcagcacattgacaagtgcttggatctgtctcagtacctgtac
aacaagatcaagaacagggagggatatgagatggtgtttaatggagtgccccagcacacc
aacgtttgcttctggtacctcccacccagcctgagaggcatgccagatggtgatgagcgg
agagaaaaactccacagggtggcgccaaagatcaaggccatgatgatggagtcgggcacc
actatggtgggctaccagcctcagggtaacaaagtcaacttcttccgcatggtcgtctcc
aaccccgcagccacccagtctgacatcgacttcctcattgatgagattgagaggctgggt
aacgacctgtag
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