Scomber scombrus (Atlantic mackerel): 133991213
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Entry
133991213 CDS
T10651
Name
(RefSeq) histone H2AX-like
KO
K11251
histone H2A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
ssco04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133991213
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133991213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133991213
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133991213
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
133991213
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133991213
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
HbrB
Motif
Other DBs
NCBI-GeneID:
133991213
NCBI-ProteinID:
XP_062285691
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All DBs
Position
11:complement(28138571..28151336)
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AA seq
261 aa
AA seq
DB search
MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRHLRKGNYAQRVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
TEKPAKNKIKITEIMSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRHLRKGNYAQRVGA
GAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQG
GVLPNIQAVLLPKKTEKPAKK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacgaggcaaaaccggaggcaaagcccgcgctaaggcaaagacccgctcctcc
cgtgccgggcttcagttcccagtcggtcgtgtccacaggcatttgaggaagggtaactat
gcccagcgtgttggtgccggtgcccccgtctacctggcggctgtgctggagtacctgacc
gctgagatcctggagctggctggaaacgctgcccgcgacaacaagaagaccaggatcatc
ccccgtcacctgcagctggctgtccgtaacgacgaggagctcaacaagctgcttggcgga
gtgaccatcgctcagggtggtgtgctgcccaacatccaggctgtgctgctgcccaagaag
accgagaaacccgccaagaataaaataaaaataactgaaatcatgagtggacgaggcaaa
accggaggcaaagcccgcgctaaggcaaagacccgctcctcccgtgccggacttcagttc
ccagtcggtcgtgttcacaggcatttgaggaagggtaactatgcccagcgtgttggtgcc
ggtgcccccgtctacctggcggctgtgctggagtacctgaccgctgagatcctggagctg
gctggaaatgctgcccgcgacaacaagaagaccaggatcatcccccgtcacctgcagctg
gctgtccgcaacgacgaggagctcaacaagctgcttggcggagtgaccatcgctcagggt
ggtgtgctgcccaacatccaggctgtgctgctgcccaagaagaccgagaaacccgccaag
aagtaa
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