Scomber scombrus (Atlantic mackerel): 133991216
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Entry
133991216 CDS
T10651
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133991216
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ssco04031
]
133991216
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
133991216
GTP-binding proteins [BR:
ssco04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
133991216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
133991216
NCBI-ProteinID:
XP_062285696
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Position
2:complement(9532886..9537301)
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AA seq
292 aa
AA seq
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MRGMMGAQSSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSVESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVANSAASGGSGGGSKANSLKRSKSFRPPQSPPKNSSSSSKGNCKIS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatgggggcccagagtagtcctgtgaagagttacgattatctgctgaaa
tttcttctggtgggagacagcgatgttggaaagggagaaatcttggacagtttacaagac
ggatcagtggagtctccctatgcctacagcagcgggatcgattataagacgaccacaatc
ctgctggatgggagacgcgtgaaattggagctatgggacacatcaggtcaggggagattc
tgcaccatcttcaggtcttactcccgaggagcacagggcatccttctcgtctatgacatc
actaatggctggtcatttgatggcattgatcgctggatccgggaaattgacgagcatgcc
ccaggtgttcccaggatcctggtgggcaaccggctccacttggctttcaagcggcaggtg
ccaacggagcaggcgagggcttatgcagagaaaaacagcatgactttctttgaggtcagc
cccctgtgcaacttcaatgtcatcgaatccttcactgagctttcgcgcatcgtgctgatg
aggcatgggatggagaaattctggaggcccaacagagtattcagccttcaagatctgtgc
tgccgttcgattgtctcctgcacaccggtgcacctcattgacaaactgcctctccccgtt
gccatcaagtcccacctcaagtctttctccatggccaacggcatgaatgcagtcatgatg
catggacgctcctactcagtggccaacagtgctgcgtcaggtggcagcggtggcggaagc
aaagccaacagtctcaaacgctcaaagtccttcaggcctccacagagtcctccaaagaac
tcttcgtcgtcctccaaagggaactgtaagatctcatag
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