Scomber scombrus (Atlantic mackerel): 133991261
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Entry
133991261 CDS
T10651
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133991261 (gata6)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
133991261 (gata6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
133991261
NCBI-ProteinID:
XP_062285753
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Position
11:complement(17902495..17909785)
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AA seq
499 aa
AA seq
DB search
MDLGNNSWSMVKREVSSSPGSPAEQTYLPGDSRRDGHTPDELRTPAPPSELDSLGHRRSD
GRSLHSYVHFGHHNNTLNTEDIPLFTDLDQGSKLVLSSGAHKASLLVDPSDMYQTLAIAA
AQSQTGYDSSSGGYMHSNPNSPVYVPSSRVGSMIPSLSYLQASGPAQPSHGVSSHSVWSQ
STPESPSYSTGSPHTSSRFHYPPSPPMNNGTPRDTGYSNTLNVSSRDQYGLSRPLNGAYP
NPYSPYVAPQLSQLSSPWPGGPFDNTMLHTLQSRGAPLIRGPNGVSEILDDMGESRECVN
CGSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRTSTSRRIGLSCANCQTSTT
TLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKTKGSSGNNNAVS
MTPTSTSSSNSEDCSKTSSPSAQVSGVSSSVLSSSGEGTGSGSAVKYPGQDGLYTSVSLS
QPSDVAPVRGEPWCPLALA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcaataacagctggtccatggtgaagcgagaagtatccagcagcccaggg
tcaccggctgaacagacctacctgcccggtgacagcaggagggacggtcacacccctgat
gagctgaggacaccggcgcctccgagcgagcttgactcactagggcatcgccgctccgac
ggcagatcactacactcctacgttcacttcggacaccataacaacaccctgaacaccgag
gacatcccgctgtttacggatttagaccagggcagcaaactcgtcctctccagcggagcg
cacaaggcgagcttgctagtggacccatccgacatgtaccaaacactggccatcgccgca
gcccagagccagactggatatgattcctcctctggcggttatatgcactccaaccccaac
tctcccgtatatgtgcccagctcccgggtgggctccatgatacccagcctctcttatctg
caagccagcggccccgcgcagcccagccacggcgtctccagccactcggtttggtcgcag
tccaccccggagagcccttcgtacagcaccgggagcccgcacacttccagccggttccac
taccctccaagcccgcccatgaataacgggacgcccagggacaccggctacagtaatacg
ctgaatgtgagcagcagagaccagtacggcctctctcggcccctcaacggagcatacccg
aatccatactctccttatgtggcaccacagctgtcccagttgtcctcgccttggcccggg
ggaccttttgataacacgatgctgcacaccttgcagagcagaggtgcgcccttgattcga
ggaccaaatggagtttcagagattttggatgacatgggggagagcagagagtgcgtcaac
tgcggctccatctccacgccgctctggaggcgcgacggcacgggccactttctctgcaat
gcctgcggcctttacagcaaaatgaatgggctgagccggccattaattaaaccacagaaa
cggacgtcaacgtccagaaggatcggcctgtcctgcgctaactgtcaaaccagcacgacc
actttgtggcgcagaaacgcagagggggagccggtgtgtaacgcgtgcggactctacacg
aaattacacggggtacctcggccactcgccatgaagaaagagggaatccaaacaagaaaa
agaaagccgaaaaccttgaataaaacgaaggggtcctctggaaataacaacgctgtgtct
atgactcccacgtccacctcttcatccaattctgaggactgctcaaaaaccagctctccc
tctgcgcaggtgtcaggggtcagttcatctgtgctgtccagctcaggggagggaacaggc
tctggatcagcggtgaagtacccgggacaggacggcctgtacaccagcgtgagtctgtcc
cagccttcagatgtagctccagtgaggggtgaaccctggtgccccttggctttagcttga
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