KEGG   Scomber scombrus (Atlantic mackerel): 133991584
Entry
133991584         CDS       T10651                                 
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03015  mRNA surveillance pathway
ssco04261  Adrenergic signaling in cardiomyocytes
ssco04382  Cornified envelope formation
ssco04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133991584 (ppp2r2d)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133991584 (ppp2r2d)
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    133991584 (ppp2r2d)
  09158 Development and regeneration
   04382 Cornified envelope formation
    133991584 (ppp2r2d)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssco01009]
    133991584 (ppp2r2d)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133991584 (ppp2r2d)
   03036 Chromosome and associated proteins [BR:ssco03036]
    133991584 (ppp2r2d)
Protein phosphatases and associated proteins [BR:ssco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     133991584 (ppp2r2d)
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     133991584 (ppp2r2d)
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     133991584 (ppp2r2d)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 133991584
NCBI-ProteinID: XP_062286024
LinkDB
Position
12:complement(17737747..17741947)
AA seq 447 aa
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQHEQE
SKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHI
NSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCN
VFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRRDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKDNVIAVAATNNLYIFQDKIN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcgggagttgcaggaggaaatgattttcagtggtgtttctctcaagtgaaaggagcg
atagatgaagatgttgcggaagctgacataatctcaacagttgaattcaactattctgga
gaactgcttgcaactggagataaaggaggcagagtagtgatatttcaacatgaacaggag
tctaagaatcgtccacacctgcgcggggagtacaacgtctatagcacttttcagagtcac
gagccagaatttgactatttgaaaagtttagaaatcgaggaaaaaataaataaaataaga
tggctaccccaacaaaatgctgctcactttctactttcgacaaatgataaaactatcaaa
ttgtggaagataagtgaaagagataaacgagcagaaggttacaacctgaaagatgaagat
ggacgactcagagacccctttagaatcacctctttacgggtaccagtactgatgccaatg
gatctcatggtagaagcaagcccacggaggatctttgcaaatgcacacacctatcacatt
aattccatttctgtaaatagtgatcacgaaacgtacctctccgcagatgacctaagaata
aatctatggcacttggaaatcacagacagaagttttaatattgtagacatcaagcccgcc
aacatggaggaactgacagaagtaatcacagctgctgagtgccatccacaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatccgcctgtgtgacatgcgagcagcggca
ctctgcgataggcactcaaagttctttgaggagcctgaggatccaagcagccgatccttt
ttctctgagatcatctcctccatctcggacgtgaagttcagtcacagcggacgctatatg
atgacacgtgactacctctccgtcaaagtttgggacctcaacatggagaacaggccagtg
gagacgtatcaggtccatgaatacctgcgcagcaaactgtgctccctgtatgaaaatgac
tgcatctttgacaagttcgagtgctgctggaatggcagtgacagtgccatcatgaccggc
tcctacaacaacttcttccgaatgtttgaccgcaacaccaggcgggacatcacactggag
gcatcccgggagagcagcaaaccacgggctaccctcaaaccccgcaaagtgtccaccggt
ggcaaaaggaagaaagatgaaatcagtgtggacagcctagacttcaacaagaagatcctc
cacactgcctggcaccccaaagataacgtgatagctgtggcagccaccaacaacttgtac
attttccaggacaaaatcaactag

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