Scomber scombrus (Atlantic mackerel): 133991584
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Entry
133991584 CDS
T10651
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03015
mRNA surveillance pathway
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04382
Cornified envelope formation
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133991584 (ppp2r2d)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133991584 (ppp2r2d)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133991584 (ppp2r2d)
09158 Development and regeneration
04382 Cornified envelope formation
133991584 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133991584 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133991584 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133991584 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133991584 (ppp2r2d)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133991584 (ppp2r2d)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133991584 (ppp2r2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
133991584
NCBI-ProteinID:
XP_062286024
LinkDB
All DBs
Position
12:complement(17737747..17741947)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQHEQE
SKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHI
NSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCN
VFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRRDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKDNVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttgcaggaggaaatgattttcagtggtgtttctctcaagtgaaaggagcg
atagatgaagatgttgcggaagctgacataatctcaacagttgaattcaactattctgga
gaactgcttgcaactggagataaaggaggcagagtagtgatatttcaacatgaacaggag
tctaagaatcgtccacacctgcgcggggagtacaacgtctatagcacttttcagagtcac
gagccagaatttgactatttgaaaagtttagaaatcgaggaaaaaataaataaaataaga
tggctaccccaacaaaatgctgctcactttctactttcgacaaatgataaaactatcaaa
ttgtggaagataagtgaaagagataaacgagcagaaggttacaacctgaaagatgaagat
ggacgactcagagacccctttagaatcacctctttacgggtaccagtactgatgccaatg
gatctcatggtagaagcaagcccacggaggatctttgcaaatgcacacacctatcacatt
aattccatttctgtaaatagtgatcacgaaacgtacctctccgcagatgacctaagaata
aatctatggcacttggaaatcacagacagaagttttaatattgtagacatcaagcccgcc
aacatggaggaactgacagaagtaatcacagctgctgagtgccatccacaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatccgcctgtgtgacatgcgagcagcggca
ctctgcgataggcactcaaagttctttgaggagcctgaggatccaagcagccgatccttt
ttctctgagatcatctcctccatctcggacgtgaagttcagtcacagcggacgctatatg
atgacacgtgactacctctccgtcaaagtttgggacctcaacatggagaacaggccagtg
gagacgtatcaggtccatgaatacctgcgcagcaaactgtgctccctgtatgaaaatgac
tgcatctttgacaagttcgagtgctgctggaatggcagtgacagtgccatcatgaccggc
tcctacaacaacttcttccgaatgtttgaccgcaacaccaggcgggacatcacactggag
gcatcccgggagagcagcaaaccacgggctaccctcaaaccccgcaaagtgtccaccggt
ggcaaaaggaagaaagatgaaatcagtgtggacagcctagacttcaacaagaagatcctc
cacactgcctggcaccccaaagataacgtgatagctgtggcagccaccaacaacttgtac
attttccaggacaaaatcaactag
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