Scomber scombrus (Atlantic mackerel): 133991587
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Entry
133991587 CDS
T10651
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
ssco04137
Mitophagy - animal
ssco04144
Endocytosis
ssco04340
Hedgehog signaling pathway
ssco04350
TGF-beta signaling pathway
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133991587
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133991587
04350 TGF-beta signaling pathway
133991587
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133991587
04137 Mitophagy - animal
133991587
09144 Cellular community - eukaryotes
04520 Adherens junction
133991587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133991587
04121 Ubiquitin system [BR:
ssco04121
]
133991587
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133991587
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133991587
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133991587
Autophagy
Mitophagy
Other mitophagy associated proteins
133991587
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
HECT type E3
133991587
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133991587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
133991587
NCBI-ProteinID:
XP_062286030
LinkDB
All DBs
Position
2:13846515..13917736
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASGPPGEQRLQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSPNGSRVAMDCQNTNL
SHPTQLKDQVVPGVPQQAMSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKSITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIP
VSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DISDWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttaggaggaatggcccagtgaagctgcggttgacagtcctgtgt
gcaaagaacctggcaaagaaagacttcttccggttgccagatccctttgccaaagtggtg
gtggatggctcaggacaatgccactctacagacactgtgagaaatacgctggacccaaaa
tggaatcaacattatgatctatacattggaaaggcagactccatcaccatcagtgtgtgg
aaccacaagaagatccacaaaaagcagggagcaggttttctgggctgtgtccgcctcctg
tccaatgccatcaacagactcaaagacacaggctatcagagactggacctaaataaactg
ggccccaatgacaatgacactgtgagaggacagatagttgtaagtcttcagtccagggat
cgcatcggtacgggaggaccggtggtggactgcagtcgcctgtttgacaatgacttaccc
gatggatgggaagagaggaggacagcatcaggaaggatacagtacctgaaccacatcact
cgtaccacacaatgggagagacccaccaggccagcttcggagtactccagcccatcaggg
cgtcctctgagctgtgtggtggatgagaacacgccagtgatgacgcccgttaacggggca
gaggccagcggcccgccaggtgaacagcgactccaggagagaagggttcgatcgcagcgg
caccgtaactacatgagtcgaacacacctgcatacaccgcctgacctgcctgagggttat
gagcaaagaacaactcagcagggccaggtctacttcctccacacacagactggagtcagc
acctggcatgacccccgggttcccagggatttaagcaatgtgaactgtgaggagctcggc
cctctgccaccaggttgggaaatcagaaacaccgcaaccggccgtgtctactttgtcgac
cacaacaatcgaacaacacagttcacagacccgcgactgtctgctaacctacatctagta
ctcaacagcccaagtccaaatggttcccgtgtggccatggactgccaaaacactaacctc
agtcatccgactcagttgaaggaccaggttgttcctggtgtccctcagcaagctatgtcc
ccagcccagttgcctgaagaggcagagtgcctgacggtgcccaagtacaagcgagacctg
gtgcagaagctgaagatcctgcggcaggaactatctcagcaacaaccccaggctggccac
tgccgcatcgaggtctgccgtgaggagatatttgaggagtcataccgacaagtgatgaag
atgcgtccaaaagatctctggaaaagactgatgatcaaattcagaggagaagaggggctc
gactacggtggggtagcaagggagtggttgtacctgctgtcccatgagatgctgaatccg
tactatggcctgttccagtactccagagatgacatctatactttacagattaaccctgat
tctgccgtcaaccctgagcacctgtcgtacttccactttgtgggtcgtatcatgggcatg
gcagtgttccacggccactacattgatggaggcttcaccctgcccttctacaaacagctg
ctgggaaaatcgatcacgctggacgacatggagtctgtcgacccggacctccacaacagc
cttgtctggatcctggacaatgacatcactggcgtcctggaccataccttctgtgtagag
cacaatgcctacggagaaatcatccaacacgagctgaaacccaacggcaagagtatcccc
gtctctgaggacaccaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcat
ggcattgaggctcagtttctggccctgcagaaaggctttaatgaggttatcccacaacac
ctgctcaaagccttcgacgagaaggaacttgagctgatcgtctgcggcctgggaaagatc
gacatctctgactggaagtccaacactcgtctgaagcactgcacccccgacagcaacatc
gtaaagtggttttggaaagcagtggagtcatttgatgaggagaggagggcccggctgctg
cagtttgttactggctcatccagagtccctctgcagggcttcaaggctttacagggtgct
gcagggcccagactcttcaccattcaccagatcgatgcaaacaccaacaatctgcccaaa
gcccatacctgcttcaatcggattgacattccaccctacgagagctacgacaagctatac
gacaagctgctgactgcgatcgaggagacctgcggcttcgcagtggaatga
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