Scomber scombrus (Atlantic mackerel): 133991610
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Entry
133991610 CDS
T10651
Symbol
pax2a
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133991610 (pax2a)
04131 Membrane trafficking [BR:
ssco04131
]
133991610 (pax2a)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133991610 (pax2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133991610 (pax2a)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
133991610 (pax2a)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
133991610 (pax2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
133991610
NCBI-ProteinID:
XP_062286056
LinkDB
All DBs
Position
12:15824196..15851884
Genome browser
AA seq
410 aa
AA seq
DB search
MDIHCKADPFSAMHLSHAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDR
LLAEGVCDNDTVPSVSSINRIIRTKVQQQFHPSPDGSVTPLSTPGHTIVPSTASPTVTSA
SNDPVGSYSINGILGIPRSNGEKRKRDDVLWSGNHLDGRKIGHYGSDGSGPGSDSQGSVE
SLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPSLNSGLEDVKP
SLSSSGSSDLASSVSQSYSVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGGDF
SGNPYSHPQYTTYNEAWRFSNPALLSSPYYYSAASRGSAPPTAATAYDRH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctccgcgatgcacctgtcccacgcagggcac
ggcggtgtgaaccagctcggcggggtgtttgtgaacggcagacccctcccggacgtggtg
aggcagcggatcgtggagttggcccaccagggcgtccggccctgcgacatctccagacag
ctacgggtcagtcacggctgtgtcagcaaaatcctcggcaggtactatgaaaccggcagt
attaaacccggagtcattggtggctccaaaccaaaggttgcaaccccgaaagtggtggat
aaaattgctgattataagcgccagaatccaaccatgtttgcttgggagataagggaccga
ctactggctgagggcgtctgcgacaacgacactgtccccagcgtttcatctatcaacagg
attatccgcaccaaagtccagcagcaattccacccttcccctgacggatctgtcacgcca
ctctccacgcccggtcacaccatagtgcccagcacagcctcccccactgtgaccagcgcc
tcaaacgatcccgtaggatcctactccatcaacggcattctgggtatcccccgctccaac
ggcgagaagaggaaacgagacgatgttctctggagtggcaaccacttggatgggaggaaa
ataggacattatggctctgatggttcaggccccggtagcgactctcagggcagtgtggag
agtttaaggaagcacctgcgagcagacgccttcacccagcagcagttggaagctctggac
cgtgtgtttgaacgcccctcttaccccgatgtcttccccacttcagagcacatcaaaccc
gagcaggcaaatgagtactcactcccgtccctgaactctggcctggaagacgtgaagccg
agcctttccagcagcggcagctcagacctcgcctccagtgtctcccagagctactctgtt
gtgacaggtcgagacatggctagcaccaccttacctggctacccgcctcatgtccccccc
acgggacaaggcagctaccccacctccacactcgctggaatggttcctggaggggacttt
tctggaaacccttattctcatccacagtacaccacgtacaatgaagcatggcggttcagc
aatccagcattactaagttccccttattattatagtgccgcatcccgtggctccgcacct
cccactgctgccactgcctacgaccgccactag
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