Scomber scombrus (Atlantic mackerel): 133991614
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Entry
133991614 CDS
T10651
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133991614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
133991614
03036 Chromosome and associated proteins [BR:
ssco03036
]
133991614
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133991614
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133991614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
133991614
NCBI-ProteinID:
XP_062286066
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All DBs
Position
12:complement(15092442..15106547)
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AA seq
1220 aa
AA seq
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MADQVATVCDQLIKAVNVIMDPETSQVYRLEALKFCEEFKETSSFCVPCGLQLADKAQSA
VVRHFGLQILEHVVKFRWNNMQQQEKVQLKDSAMQLLSKGTHPILEEESHIKDVLSRIIV
EMIKREWPQHWPDMLKEMEALTSQGEAQTELVMLILLRLAEDVITFQTLPTQRRRDIQQT
LTQNMDNIFSFMMAILHLNVEDYRKLKGSQGHEIQTKAHCRVAVTTLNTLAGYIDWVSLV
HITSGNCHLLEMLCLLLSEPELQLEAAECLLIAIRRKGKLEDRKPFMLLFDDVAIHYILS
AAQSADGLAICKKSSDAQAVEVVERRYSFLKRLCQVLCALGSQLCSLVGSDVEVEVPANL
GKYMEAILAFTTHSSQFLKSSTVATWGALFRHETLSKEMAIVEMAVKYLRASMINLVKIG
FPSKNDNPSCEYSRVDFDSDEDFYSFFNSFRAQQGEVVRAACRIVPLQAFQIAAEWLQYQ
IGSPIDTGDTTSKTAEGLCTLLSPSVVQWDAMTIFMECMVAQIFRTLGEEQLPIDQSMEL
LQAVLNYDTKDPLILSCVLTNVSALFPFVIHRQHFLPQVLYKLFKAVTFDIIQENKAPRT
RAVKNVRRHACSSIIKICRDYPQFILPCFDMFYNHVKKLFSNDVTLTHMEKCSLMEALVL
ISNQFKDFAKQKAFLDELMASVVAEWTSEEMRRVLWDPVAFLSFAGADQMVTEQSKDTDT
AGLNRGRLSFCLYAMLGVVKRARWPADLEEAKAGGFVVGYTPAGAPIYRNPFTAQFLLLL
PNVLALIRTHNSLFLPENRVRLSETFSRAHEVMDAEKNVILGLSQHLLDIYDTPLYRSSL
ERMQGFFTTLNDNCFHVLGNAGLSLQQEFYTIERLAEEIAASALASLDHVPDHRLRPMIR
VFLRQLVSSCPQEYYDTLLCPLLSSLFTYMLQSLNMKWQVINQRTSVNGEDEEVVVYQDS
QVTQEMLEEQLVRLLTREVLDLLTLSCISRKVPEPAANKEEIDEEDMMMDSVQTASSTQP
TEELTELGKCLMKHETIYMNLLTLSFTSLSWKDTTNCHRTASMVCWTLLRQVVGGNLLPE
AVMWFYTSVLRGLQVHGQHEVCKSTLSQLAMLIYENLRPRYIELRAVMTQIPNINVEALD
QYDHRLMDPNAQNVGDKKRKDQFRKLIAGTIGTALCQQFRKEVHIRNLPSLFKKPKQDKD
VPSSEALGLAALFTPENNTL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggtggctaccgtgtgtgaccagctcatcaaagctgtgaatgtgataatg
gacccagaaacgagccaagtttaccgactggaggccctaaagttttgtgaggagtttaaa
gagacaagctcattctgtgtcccatgtggcttgcaattagccgacaaagcccagtcggct
gtagtgagacactttggtttgcaaatcctggagcacgtcgtcaagttcaggtggaacaat
atgcaacagcaagaaaaagtccagctaaaggacagtgccatgcagctgttatcaaagggt
actcatcctatcctggaggaggagagtcacattaaagatgtcctttcacgaataatagta
gaaatgataaagagagaatggcctcaacattggccagatatgcttaaagagatggaggct
ctcacaagccaaggggaggcacagacagagctggtgatgctgatcctgttgaggctagcg
gaggatgtgatcaccttccagacgttgcccacacaacgccgcagagacatccagcagacg
ctcacgcaaaacatggacaacatcttcagcttcatgatggccattctgcatcttaatgtt
gaagactaccgtaaactgaaagggtcacaagggcacgaaatacagaccaaagctcactgt
cgagtcgctgtgactacgctcaacacactcgcgggctacatagactgggtgtctctggtg
cacataacttctggaaactgtcacctgctggagatgctgtgtctgctgctgagtgagcca
gagctgcagctggaggctgcagagtgtttgctcatcgcaatcagacggaagggtaagctg
gaagataggaagccattcatgctgctgtttgatgatgtggccatccactacatcctttct
gcagcccagtcagcagatggactagcaatatgcaagaaatcttctgatgcacaagcagta
gaggtggtggagcggcgttacagcttcctgaagagactgtgtcaggtgctctgcgcactg
ggaagccagctttgttcgttagtgggttcagatgtagaggttgaggtacctgcaaatctc
ggcaagtacatggaagccattttagccttcactacacattccagtcagtttttgaagtca
tccactgtggctacttggggagctttgttcagacatgaaactctgtcaaaagaaatggct
attgtggagatggccgtaaaatacctcagagcgtctatgatcaacctagtcaagattggg
tttccatctaaaaatgataacccaagttgtgagtactccagggtggactttgacagtgac
gaggacttctactcattctttaactctttccgagcgcagcagggagaggtggtgagggct
gcatgtcgcattgttcctctgcaggctttccagatagcagcagaatggttgcagtatcag
atcggcagccccatcgataccggagatactacatctaagactgctgagggcctgtgcacc
ttattgtctccgtcagtggtccagtgggacgccatgactatcttcatggagtgcatggtc
gcacagatcttcagaactctgggggaggagcagttgcccatagatcagagcatggagctg
ctgcaggccgtgctgaactacgacaccaaagaccctctcatcttgtcctgtgtgctcacc
aacgtctctgctctgttcccatttgtcatacacagacagcacttcctgcctcaggtcctt
tacaagctgtttaaagccgtcacatttgatatcatccaggaaaataaggcacctcggacc
cgagctgtaaagaatgtgaggaggcatgcttgctcttccatcatcaagatttgccgggat
tacccacagttcattttgccttgtttcgacatgttttacaatcacgtgaagaagctgttc
tcgaacgacgtcacactgactcacatggagaaatgttcactgatggaagctctggtgctt
atcagtaaccagttcaaagattttgcaaagcaaaaggcttttttagatgaactgatggcc
tctgtggtcgcagaatggacttcagaagagatgaggcgtgtgctgtgggaccctgtcgcc
ttcctttcctttgctggagctgatcaaatggtcactgagcagagtaaagatacagacaca
gcaggccttaatagaggacggctgagtttctgtttgtatgccatgttgggcgtggtgaaa
cgggcacgttggcctgcagacctggaggaggccaaggctgggggctttgtggtgggctac
accccagctggagctcccatctacagaaaccccttcactgcccagtttctgcttttgctg
cccaacgtgttggctctcatcaggactcacaacagtctgttcttgccagagaacagggtt
cgtctgagtgagaccttctccagggcccacgaggtgatggatgcagagaaaaatgtgatt
cttggtctctctcagcatctcctggatatttatgacactcctttgtatagatccagcctg
gagcgcatgcagggatttttcaccacattgaatgacaactgcttccacgtcttgggaaat
gcaggtctgtctttgcagcaggaattctacacaattgagaggttggctgaagaaatagct
gcctctgctttggcctccctcgaccatgtgcctgaccacagacttcgtcctatgattcgt
gtgtttctgaggcagttggtgtcctcatgtccacaggagtactacgacaccctcctctgc
cccctgctgagctctctgttcacctacatgttgcagagtctcaacatgaagtggcaggtc
atcaaccagaggacttctgtcaatggtgaggatgaggaggtggtggtgtaccaagacagt
caggtgacgcaggagatgttggaggagcagctggtacgcctgcttaccagggaggtgctt
gatcttctcactctgagctgtatttcaagaaaagtgcctgaaccagcagcgaataaggag
gaaatcgatgaggaagacatgatgatggattcagtgcagacggcgtcttctacacagccc
acagaggagctgactgagctgggaaaatgccttatgaaacacgagaccatctacatgaac
ctactgacgctgtccttcacctcgctgtcgtggaaagacaccactaactgccaccgcact
gcttccatggtctgctggacccttctgcggcaggtcgtagggggcaatcttcttcctgag
gcagtgatgtggttttataccagcgttctgaggggccttcaagttcatgggcagcatgaa
gtctgcaaatctaccctctctcagctggccatgctcatctatgaaaacctgcgacctcgt
tatattgagctgagagcagtgatgacgcagatcccaaacatcaatgtggaggctctggac
cagtatgaccacaggctgatggaccccaatgcccagaacgttggagacaagaagaggaaa
gaccagttcaggaagctcattgcaggaactattgggacagctctgtgccagcagttcagg
aaggaggttcatatccggaatcttccatcgctctttaaaaagccgaagcaagacaaagat
gtgccgagcagtgaagcactgggcctggcagctctcttcactccagagaataataccctg
tag
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integrated database retrieval system
