Scomber scombrus (Atlantic mackerel): 133991625
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Entry
133991625 CDS
T10651
Symbol
kcnh1a
Name
(RefSeq) potassium voltage-gated channel subfamily H member 1a
KO
K04904
potassium voltage-gated channel Eag-related subfamily H member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133991625 (kcnh1a)
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
133991625 (kcnh1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PAS_9
cNMP_binding
Ion_trans_2
PAS
PAS_3
PAS_4
Cupin_2
Cupin_3
Motif
Other DBs
NCBI-GeneID:
133991625
NCBI-ProteinID:
XP_062286088
LinkDB
All DBs
Position
12:complement(21737834..21779812)
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AA seq
963 aa
AA seq
DB search
MAGGRRGLVAPQNTFLENIVRRSNDTNFVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQ
KSSTCSFMYGELTDKDTTEKVRLTFENYEMNSFEILMYKKNRTPVWFFVKIAPIRNEQEK
VVLFLCTFSDITAFKQPIEDDSSKGWGKFARLTRALTSSRGVIQQLQPTVHKGENVHKHS
RLAEVLQLGSDILPQYKQETPKTPPHIILHYCLFKTTWDWVILILTFYTAIMVPYNVSFK
TKQNNVTWLVVDSIVDVIFLVDIVLNFHTTFVGPAGEVISDPKLIRMNYLKTWFVIDLLS
CLPYDVINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYIEYGAAVLVLLVCVFGLA
AHWLACIWYSIGDYEVIDEETNIVRMDSWLYILAETVGRPYRFNASGSGKWEGGPNKDSV
YITSLYFTMTSLTSIGFGNIAPTTDGEKIFAVAMMMIGSLLYATIFGNVTTIFQQMYANT
NRYHEMLNSVRDFLKLYQVPKGLSERVMDYIASTWSMSRGIDTEKVLQICPKDMRADICV
HLNRKVFKEHPAFRLASDGCLRALAMEFQTIHCAPGDLIYHAGESVDSLCFVVSGSLEVI
QDDEVVAILGKGDVFGDVFWKEVTLAQACANVRALTYCDLHVIKRDALQKVLEFYTAFSN
HFSRNLLLTYNLRKRIVFRKISDVKREEEERQRRKNEAPLNLPPDHPVRKLFQRFRQQKE
ARLVTDKPEDDHDIEKGQVFVDIPIANTAITTTSIVTVTESPATPSSSTPSSSTPPNCTP
TDKAKLQVPPPVSLVGGRVAEPVKVKGWGRFKESMAKTDNWNKVSKAESMETLPERTKGH
ESQMSLKKTDSCDSGITKSDLRLDKVGDFRLTPQDRSPVQPPETRHPFYPIPEQTLQASL
QELKLELKDDLKNLNVRMSGLEAQLTEALQLLKARKSAAGSPQHLFDISRPASPELDKED
IFS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggtcgcaggggacttgtggcccctcagaatacttttttggagaatattgtc
agacggtcaaacgatacaaactttgtcctgggaaacgctcagattgtggactggcccatc
gtctacagcaatgacggtttctgcaagttgtcgggctaccacagagccgaggtgatgcag
aaaagcagcacctgcagcttcatgtatggggagctcacggacaaggacacgacggaaaaa
gtgcggctaacgttcgagaattatgagatgaattcgtttgaaatactgatgtacaagaag
aacaggacgcctgtttggttttttgtgaagattgctcccattcgaaatgaacaagaaaaa
gtggtcctgtttttgtgcacattcagcgacatcacagcctttaaacagcctattgaagac
gattcttccaaaggttggggaaagtttgccagacttactcgagctcttacaagcagcaga
ggagtcatacaacagctgcagcccacagtccacaaaggagaaaatgtccacaaacactcc
cgcttagctgaggtcctgcagctcggctcagacatcctacctcagtacaaacaggagacc
cctaaaacccctcctcacataatcctgcactactgcctcttcaagaccacgtgggactgg
gtcatcctcatcctcaccttctacactgccatcatggtgccctacaacgtctccttcaag
acgaagcagaacaacgtgacgtggctggtggtggacagcatcgtggacgtcatcttctta
gtggacatcgttttaaacttccacaccacgtttgtgggcccagctggcgaggtcatctct
gaccccaagctgattcgaatgaactacctgaagacctggtttgttatcgacctgctgtcc
tgtctgccctatgatgtcatcaacgccttcgagaatgtagatgaggggatcagcagtctc
ttcagttcactcaaggttgttcgcctcctccgtttgggtcgggtcgcccgtaaactggat
cactacatcgagtacggagcggctgtgctggtcctgctggtgtgtgtttttggactggcg
gctcattggctggcctgcatttggtacagcatcggtgattacgaggttatcgatgaagaa
accaacattgtgcgcatggacagctggctgtacatcctggctgagacggtgggcaggccg
taccgcttcaacgccagcggctcagggaagtgggagggcggcccaaacaaggactctgtc
tacatcacttccttgtacttcaccatgaccagcctgacgagtatcggctttggaaacatt
gccccaaccacagatggagagaaaatctttgctgtggccatgatgatgattggatccctt
ctttatgccaccatctttggtaacgtaacgacaatcttccagcagatgtacgccaacacg
aaccgttatcatgaaatgctgaacagcgtccgggacttcctcaagctctaccaggtgccc
aagggcttgagcgaaagggtcatggactacattgcatcaacctggtccatgtcacggggt
atagacactgaaaaggtgttgcagatttgtccaaaggacatgagagcagatatttgcgtt
catctcaaccggaaggtttttaaagagcatccagctttccggctggccagcgacgggtgt
ctcagagcgttggccatggagtttcagaccatccactgtgcgcctggtgatctcatctac
cacgctggtgaaagtgtggacagcctctgttttgtggtgtctggatcgctggaggttatt
caggatgatgaggtggtggccattttaggtaagggagatgtatttggagatgttttctgg
aaagaagtgactctcgctcaagcctgcgccaacgtccgtgccctgacctactgtgacctg
cacgtcatcaaacgcgatgccttgcagaaggtgctggagttttacacggcgttctccaac
cacttctcaagaaatctgctgctcacttacaacttgcgtaagaggatcgtcttccgaaag
atcagtgatgtgaaacgagaggaggaggagcgacagagacgtaaaaatgaagcccctctg
aacttgccaccagatcatccagtacgaaaactcttccagcgctttagacagcagaaagaa
gcccgcctggtgacagacaagccagaggatgaccatgatatcgagaagggccaggtgttc
gtggacatccctatagctaatacagccattactactaccagcattgtcacagtaacagaa
agcccagcaacaccctcatcttccacgccttcatcttcaacaccccccaactgtactcct
acagacaaggcgaagctgcaggtgccgcccccggtttcccttgtgggaggtcgggttgct
gagccagtcaaagtgaaaggctggggtcgcttcaaagagtcaatggccaaaactgacaac
tggaacaaagtgtctaaagccgagtctatggagactttgcctgaacggaccaaggggcac
gaatcacagatgtctctaaagaagacggactcatgtgacagcggtatcaccaaaagtgac
ctgcgccttgacaaagtcggtgacttccgcttgaccccgcaggaccgcagtccagtgcag
cccccggagacccgacaccccttctaccccatcccagagcaaacacttcaggcttcactt
caggagctaaagctggagctgaaggacgacctcaagaacctaaatgttcgaatgtctggg
ctggaggcgcaactcactgaagcacttcaactcctcaaagcgaggaaatcagctgctgga
tctccgcagcatctctttgacatttctagacctgcttcacctgaactcgacaaagaagac
atcttctcttga
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