Scomber scombrus (Atlantic mackerel): 133991643
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Entry
133991643 CDS
T10651
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133991643
04082 Neuroactive ligand signaling
133991643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133991643
Ion channels [BR:
ssco04040
]
Ligand-gated channels
GABA-A
133991643
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Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Thymidylat_synt
Motif
Other DBs
NCBI-GeneID:
133991643
NCBI-ProteinID:
XP_062286114
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Position
12:6502212..6521101
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AA seq
460 aa
AA seq
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MHVCAYVDMLLLVLFLLRLLEGSMFNAEVKEGEILPPTIQRLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTYTDTHILMHYGHQMHEFEDEMNGIVTTIS
HTNRAKRRKEPAATPPTAPTSTELTVSPASPSGSEPKPEATPPERTNRCLTVLATVRKLF
GFISCCHIKNPHHIDNYSRVSFPLSFVMVNLLYWTYYLYF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtatgtgcgtatgtggacatgcttctattagttctctttcttctcaggttgtta
gagggctcgatgttcaacgcagaagtgaaagaaggagagattctgcctcccaccattcag
aggctgatgaaaggatacaacaagtacctcaggcctttctttgacaatggtcctgtaaca
gttggtatgagcttggacatcgccagcattgacaccatttcagagatcaatatggactac
accgccaccatattcctccgccagcgctggacggacgagcgcttggtgttcgagggcaac
aagagcctgagcctcgacgggcgcctggtggagctcctctgggtacccgacaccttcatc
gtggactccaagaagtcctttctccacgacattaccgtggaaaacaggctgatccgcatc
ttcccaaatgggaccgtcctttacgcactgaggattaccaccactgtggcctgcaacatg
gatctgaccaaatatcccatggacaagcagacctgcaccctacaattggagagctggggt
tacaacatcaatgatgtcatgttctactggactagagggaatgagtctgttagcggctta
gacacacttcagctggcccagtacacagtggaggaccactacacctctgtgtcagaggcc
gtctatgaaactggcaactaccccaagctggtcttccactttgaactgaagaggagcatt
ctgtatttcatactggagacttacgtcccctcgagcctgctggttgtcctctcatgggtc
tccttctggatctccctgtcctctgttccagcacgtatttgtataggagtgaccacagta
ctcaccatgaccaccctcatgatgggagcccggacgtcactgccgaacgccaactgcttc
atcaaggccatcgacgtgtacttgggaatctgctttagctttatcttcggggcgctcatt
gagtacgccgtcgcccacttctgcaccctcacttacaccgacacccacattctcatgcac
tacggccaccaaatgcacgaattcgaagacgagatgaacggcatcgtcaccaccatcagt
cacaccaacagggccaagagacgcaaggagcctgccgcgacccctcccacagctcccacc
tccacagaactaacagtcagcccggccagcccttcaggcagtgagccaaagcccgaggcg
acccctccggagcgcaccaataggtgcctcactgtcctggccaccgtccgcaaactcttc
ggcttcataagctgctgtcacatcaagaacccccaccacatagacaactactcaagagtc
agcttccccctgtctttcgtcatggttaacctgctctactggacatattatctgtacttt
tag
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