Scomber scombrus (Atlantic mackerel): 133991653
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Entry
133991653 CDS
T10651
Symbol
ppifa
Name
(RefSeq) peptidylprolyl isomerase Fa
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133991653 (ppifa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133991653 (ppifa)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133991653 (ppifa)
Chaperones and folding catalysts [BR:
ssco03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133991653 (ppifa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
133991653
NCBI-ProteinID:
XP_062286124
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All DBs
Position
12:16156110..16158259
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AA seq
190 aa
AA seq
DB search
MYQIKTRMRYSPLGIAAARLTSSGPDKNPVVFLDIEADGEPLGRIIIELNADKVPKTAEN
FRALCTWEHGFGYKGCVFHRVIPEFMCQGGDITNFNGTGGKSIYGKSFKDENFKLKHTGS
GTLSMANSGPNTNNSQFFISTTKTDWLDGKHVVFGQVKEGMDVVTKMESFGLHDGGVIKK
IVITDCGELK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagattaaaacccgcatgagatacagcccgctgggtattgccgctgccaggttg
acttcctccggtcccgacaagaacccagtcgtgtttctggacatcgaggctgacggagag
cctcttggaagaataatcatcgagttgaatgcagacaaagtgccaaagactgcagaaaac
ttcagagcactgtgtacctgggagcatggctttggatataagggatgtgtgtttcacaga
gtcatacctgagttcatgtgtcaggggggagatatcaccaacttcaacggcacaggaggg
aaatcgatatacgggaaatccttcaaagatgaaaacttcaaattaaaacacactgggtca
ggaaccctgtcaatggctaattcagggccaaacaccaacaactcacagttctttatcagc
acgactaaaactgactggcttgatggtaaacatgtggtgttcgggcaggttaaagaaggt
atggacgtggtcacaaagatggaatcctttggtttacacgatggcggtgtgataaagaaa
attgtcataactgactgcggggaactcaagtaa
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