Scomber scombrus (Atlantic mackerel): 133991667
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Entry
133991667 CDS
T10651
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133991667 (rrp12)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
90S particles
Other 90S particles
133991667 (rrp12)
Pre-60S particles
Other pre-60S particles
133991667 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
133991667
NCBI-ProteinID:
XP_062286140
LinkDB
All DBs
Position
12:complement(14004146..14014231)
Genome browser
AA seq
1291 aa
AA seq
DB search
MVKSGKLKSGTGSKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPTEKSDLTVDALKLHN
ELQAGPLEISAGGHKDACMEEEADQALSDRTSGTFLSGLSDCSNLTFRKVQRYWESNSAA
HKEICAVLAAVTEVIRGQGGKETETEYFAALMTTLEVVDSAESQAAVAYLLNLVMKRVPA
PVLMSKFSDTTKALMDVMSKQATSEAASALRWILSCLATLLRKQDASVWTYPTTLQAYHG
LLSFTVHNKPKVRKAAQQGVCSILRGSDFLFTDRAPTHHPAAVTTAKFCIKEMDQAGGSK
EDTTTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHVLVTASAMQAFHRLFSGKPNA
AALTPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLAGLQSSLSLGHLPRLFSA
AMSCLLSPHTQVVSAATNTLKTLLTECVAPCMEEMGMITATASAGNPSSVCKMFRIVEEG
LSYRFHASWPFVLQALGCFYHVAGKQAHPIMTKSLQSLADLRCTQQFPFSGELDLAVGGA
VESMGPEVVLGAVPLNITGYNDDLEFPRSWLVPVIRDHVKNTHLGFFNSYFLPLASTLKQ
RAEELEQQGQKLEAKVYQTLQLQMWTMLPGFCTCPVDLVASFKGVARTLGMAINERPDLR
LTVCQALRTIINKSCSTEEDKAEVGRFSKNFLPILFNVYSQQPTAGESGTYRMAVLDTIK
VYLTVTEMQMINTFLQKATDRLSCTDSTEFTRLSMMDLVVAMAPFLDEVSMTNTFELIKP
YLQTKEPGMQKKAYRVLEEMCGGERDECRSFVVTNLETLKVALLESLKNASSPAKRPRLK
CLINIVKRLGEEHKDFITALLPEVIICTKEVSVGARKNAYNLLVEIGNAFVRFCGNKKDA
MEQYLVLVYAGLTGSVTMITCTILALTRLVFEYKDSIEVSTMEQLLHNVCVLLGARTREI
VKAALGFIKVILFIMDHKTLGSHVTVMMEGIGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSMLPAEHHKVLANIRKAEARTKRRKQASEQQDDSESEEEAPKAKNESIEDILAESDS
DLSEDEGKAGKAQKKAGKQQKGRAWLKEGEEDDPLNFLDPKVSQRVLATNPELKKSAKVE
HGFRVTSDGRLIIREDEEEEDVKDKDKGDMNDILEEAGVKSKKTQKRKFKDDNFDDDMDI
DPQLQYKAGGSGIHRPLGLGLDTGLDYKSKKGKGDVKKKGKLDPYAYIPLRKAQLNRRKR
AKLQGQFKGMVKGAQKGAQSGKKMQKKKRKA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcggggaaacttaaatccgggacggggtccaaactcaaacggtggaagaag
ggacacagcagtgactccaacccgcagacgagtcgctttcgacaggccgcaaaaagccgc
ttcttcagccgacccaccgaaaagagtgatctaacagttgatgctctaaagctacacaat
gagctgcaggcaggtccactggagatcagtgccggtggccataaagatgcctgcatggaa
gaggaggcagaccaggcgttatcagacaggacctccggcaccttcctcagcggtctgtca
gactgctccaacctgacatttagaaaggtgcaacgctattgggagtccaattcagctgct
cacaaagagatctgtgcggtgttggcagctgttactgaggtgatccgtggtcagggaggg
aaggagacagaaacggagtactttgcagctttgatgaccaccctggaggttgtagattca
gcggagtcacaggctgcagtagcatacctcctcaacctcgtcatgaaaagggttcctgct
ccagtcctcatgtctaagttctcagacaccaccaaagctctgatggacgtcatgtctaaa
caggccacatctgaggccgcctcagctctcagatggatcctgtcatgcctggccactctg
ttgaggaagcaggatgcatccgtctggacttacccaaccactcttcaggcttatcatggc
ctgctcagcttcacagtgcacaacaaaccaaaggtgcgtaaagcggcacagcagggtgtg
tgctccatcctcagaggtagtgacttcctgttcacagatagagccccgacacaccatcct
gctgcagtgaccacagccaagttctgcatcaaagaaatggatcaggcaggaggcagcaaa
gaggacaccacaacacttcatgtgctgggccttctaaaggagttgatggggacgtttcct
ctgggagctgtcaagtcctgttgtgagacattgctgcgagtgatgacactcagtcatgtg
ctggtgactgcaagtgccatgcaggcttttcataggctattcagcgggaagccaaatgct
gcagctctgacaccagaacttaatgcacagatcatcacggctctgtacgactacctgccc
agtgagaatgacctgcagcctctgttggcctggctcgctgtcatggagaaagcacatgtt
cacttggcaggtttgcagagttctctgagtttgggtcacctgccccgcctcttctctgct
gccatgtcctgcctgttgtcgcctcacacacaggtggtttctgcagccaccaacacactt
aagacactgttgactgagtgtgtggccccctgcatggaggaaatgggcatgatcactgcc
acagcctctgcagggaacccttcttctgtctgcaaaatgtttcgtattgtagaagaagga
ttgtcttatcgcttccatgcgtcctggccatttgttctgcaagcgctcggctgtttctac
catgttgcagggaaacaagctcaccccatcatgactaagtccctgcagtctctggcagac
ctgcgctgcactcaacaattccccttcagtggtgagttggatctggctgtaggaggagct
gtagagagcatggggcctgaagttgtgttgggtgctgtgcctctcaacatcactggctac
aatgatgacctggagtttccgcgtagctggctggtcccggtcatcagagatcacgtgaag
aacactcacctgggtttcttcaactcttatttcctccctttggcttctacactcaagcag
agagctgaagagttggagcagcagggacagaaactggaggcaaaagtctatcagacctta
cagcttcagatgtggaccatgctccctggtttctgtacatgtcctgtggatctggtggca
tccttcaaaggagtcgcccgcactctgggcatggctattaatgaacgcccagacctgagg
ctcacagtctgccaggctctgcgcaccatcatcaacaaaagctgcagcacagaagaagat
aaggctgaagtgggccgcttctctaagaacttcctgcccatcttgttcaatgtgtacagc
cagcagcctacagccggagagtctggcacctataggatggctgttctagacaccatcaag
gtctatttaaccgtcactgaaatgcagatgatcaacacattcctgcaaaaagccacagat
agattgagctgcacagacagcaccgagttcacacggctgtcaatgatggaccttgtggtt
gccatggctccctttttagatgaagtcagcatgactaatacctttgagctgatcaaacca
tatttgcagactaaagaaccaggcatgcagaagaaggcgtaccgcgtgctggaggagatg
tgcggaggagagcgtgatgagtgcagatcatttgtcgtgactaatctagaaactctaaaa
gttgccctgctcgagagtcttaaaaacgcctcttcaccagcaaagaggccgagactcaag
tgtctgatcaacatcgtgaagaggctgggtgaagaacacaaggactttatcaccgcactg
ctgccagaggtgattatatgcaccaaagaggtatctgttggagctcgtaagaatgcctac
aatctgctggtggaaataggaaacgcatttgtccgcttctgtgggaacaaaaaagatgcc
atggagcagtatttagtgttggtgtacgcaggactcacaggctccgtcaccatgatcacc
tgtacaattttggcgctaactcgacttgtgtttgagtataaagactcaatagaagtgtcc
accatggaacagctgctgcacaatgtttgtgtcctgctgggggctcgtaccagggagatt
gtgaaagccgctttgggcttcatcaaagtcatcctcttcatcatggatcacaagactctg
ggttcacatgtcactgtcatgatggaaggcattgggaacattaaggatgacgtgaggaga
cacttcagaaccaaactgaagaacatcttcacaaagtttatcagaaagtttgggtttgag
ttggtgaagagcatgctgcctgcagaacatcacaaggtgctggcaaacattcgcaaggcc
gaggctcgcaccaagagaagaaaacaggcctcagaacagcaggacgactccgagagcgaa
gaagaagcacctaaagccaagaatgaaagtattgaggacatccttgcagagtcagacagt
gacttgtcagaggatgaaggaaaggctggtaaagctcagaagaaagcaggcaaacagcag
aagggacgtgcctggctcaaagaaggagaggaagatgacccactcaacttcctggacccc
aaggtttcccagagagtacttgctacaaacccagagctgaagaagagcgccaaggttgag
cacggcttcagggtgacttcagatggacgtttgattatcagagaagatgaagaggaggag
gatgtgaaagacaaagataagggagatatgaatgatatcctagaagaagctggagtcaag
agtaaaaagacacagaagagaaagtttaaagatgacaactttgatgacgacatggacatt
gatccccagttgcaatataaagccgggggctcaggaatccacagacccctgggactaggc
ctagacaccggattagactataagtcaaagaaaggaaagggagatgtgaagaaaaaagga
aaactcgacccgtacgcttacatccctctcaggaaggcccagctcaatcgcaggaagcgt
gccaaactgcagggccagttcaagggcatggtaaaaggagcccagaagggggcgcagtca
ggaaagaaaatgcagaagaaaaagaggaaagcctga
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