KEGG   Scomber scombrus (Atlantic mackerel): 133991679
Entry
133991679         CDS       T10651                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133991679 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssco03041]
    133991679 (cdc5l)
   03400 DNA repair and recombination proteins [BR:ssco03400]
    133991679 (cdc5l)
Spliceosome [BR:ssco03041]
 Complex B
  Other components
   Prp19 complex
    133991679 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    133991679 (cdc5l)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133991679 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 133991679
NCBI-ProteinID: XP_062286157
LinkDB
Position
12:complement(27878519..27888993)
AA seq 812 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEETGEDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDVQKKRKKKRGVDYNAEIPFEKKPASGFYDTSMENYDALEPNFK
RLRQQHLDGELRNEREERDRKKDKQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPSP
QITDAELEEVVKLGVASEVARQAAEESESGNSASSALLSEYSVTNTMATGLRTPRTPAVQ
DRILQEAQNLMALTNIDTPLKGGLNTPLHESDFSGVTPKGQQIQTPNTVLTTPFRTPGQG
QGAEGLTPQVGGALTPRGAITPGLTPVRTPLRDKLNINSEEQLADPAFSKHLQRENLQQL
RQGLSSLPVPKNDFEIVLPENAEKELEETEAETGFVEDAADIQARKQAVRDAEREKELKL
RHTSVQRSLPRPTEVNESVLRPGSMDPLADLQLAEELIKQEMITMLHHDCLHHPSANAGS
QMQRGKARGPASTSNNASHISYLESHSYKPVSTEEMDQAKLILAAEMEVVKGGMGHGDLS
MEAYSQVWEECYGQVLYLPSQNRYTRANLASKKDRIESLEKKLDVNRGHMTAEARKAAKL
EKKLKILLGGFQSRALGLLKQHGELWEQVEQAATELQTFNQLKKQEDTAIPRRQAALRED
VERQMERERELQQRYGELIMDREALINSAQKY
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgccgcgtatcatgataaaaggaggcgtttggcgcaacactgaggatgagatcctcaag
gcagcggtgatgaaatatgggaaaaaccagtggtctcgtatcgcttccctacttcaccgc
aagtctgccaaacagtgtaaagcaagatggtacgagtggctggatcccagcatcaagaaa
acagagtggtccagagaagaggaggagaagctgcttcacttggccaagctgatgccgact
cagtggaggaccatcgctcctataatcggacgcactgctgcccagtgtctggagcactat
gaatacctgctagacaaagcagcacaaagagacaatgaggaggagacgggagaggatcct
aggaagttaaaaccaggagagatcgaccctaatcctgaaactaaacctgccaggccggac
cctgtggacatggacgaagatgagctggagatgctgtcagaggccagggctcgactggcc
aacacccagggcaagaaagccaagaggaaggccagagagaaacagctggaggaagccaga
cggttggctgctctgcagaagcgcagagagctgagagcagcaggaatcgatgttcagaag
aagaggaagaagaagagaggagtggactacaacgctgaaatcccattcgaaaagaaaccc
gcatcaggtttctatgacactagcatggagaattacgacgctctggagccaaacttcaaa
cgactccggcagcagcacctggatggagaactacgcaatgaacgtgaggaaagagacagg
aagaaagacaaacagaagattaagaagaagaaagaaagcgatctgccgtctgccatcctg
cagaccagcggagtggccgagttcaccaagaaacgctccaaactggttttaccgtcacca
cagatcactgacgctgagctcgaggaagtcgtcaagctgggtgtcgccagtgaggtcgcc
cgtcaggctgcggaggagagcgagagcggcaactctgcctcctccgccctcctgtcagag
tacagcgtcaccaacaccatggcgacgggactacgtaccccccgcacccctgctgtccag
gaccggatactgcaggaagcacagaacctgatggctctgaccaacatcgacactcctctg
aagggaggcctcaacaccccgcttcacgagagcgacttcagcggagtgacgcctaaaggc
cagcagatacaaacacccaacactgtgctcaccacgccgttcagaactcctggacaaggc
caaggggcggagggcctgacccctcaagtcggaggagcgttgaccccacgaggggccata
acccccggtttgacccccgtccgcacaccgctgagagacaaactgaatattaacagtgag
gagcaactggccgaccctgctttttctaaacacctgcaaagagaaaacctgcagcagctg
agacaaggcctctcgtcacttcctgttcccaaaaacgactttgagatcgtcctccccgaa
aacgcagagaaagagctcgaagaaaccgaggcggagaccgggttcgtagaggatgcggcc
gacatacaggcacgcaagcaggccgtgcgggatgcagagagagagaaggagctgaagctg
cgacacacttctgttcaaagaagtctccccagacctaccgaggtaaacgagtccgtcctc
cgccccggctccatggacccgctggccgacctccagctggcagaggagctgatcaaacag
gaaatgatcaccatgctgcaccacgactgcctgcaccacccgtcggccaacgccggcagc
cagatgcagcgcggcaaagctcgaggtcccgcctccacgtccaacaacgcctcacacatc
tcgtacctggaatcacactcctacaaacccgtcagcacagaggagatggaccaggctaag
ttgatactggcagcagaaatggaggtggtgaagggaggaatgggccacggagatctcagc
atggaggcctacagccaggtgtgggaggaatgctacggacaggtgttatatctaccaagt
cagaacagatacaccagagctaacctggcatcaaagaaagaccgaattgaaagcctggag
aagaaactggatgtgaaccgcggtcacatgacagccgaggctcgcaaagcagctaaactg
gagaagaaactcaaaatcctcctgggagggtttcagtccagagcgctgggcctactgaag
cagcacggtgaactctgggaacaggtggagcaggcggccacagagctccagaccttcaat
cagctgaagaaacaagaagacactgcaattcccaggagacaagcggctctgcgggaagac
gtggagaggcagatggagcgagagagagaacttcagcagagatacggagagctgatcatg
gacagggaggcattgattaatagtgctcaaaaatactga

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