Scomber scombrus (Atlantic mackerel): 133991819
Help
Entry
133991819 CDS
T10651
Symbol
epcam
Name
(RefSeq) epithelial cell adhesion molecule
KO
K06737
epithelial cell adhesion molecule
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133991819 (epcam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133991819 (epcam)
04090 CD molecules [BR:
ssco04090
]
133991819 (epcam)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
133991819 (epcam)
Exosomal proteins of colorectal cancer cells
133991819 (epcam)
CD molecules [BR:
ssco04090
]
Proteins
133991819 (epcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPCAM-Trop-2_C
Thyroglobulin_1
TM_ErbB1
Trp_oprn_chp
PMP1_2
EphA2_TM
m04gp34like
7TM_GPCR_Srv
CcmD
Phage_holin_3_6
COX6C
Motif
Other DBs
NCBI-GeneID:
133991819
NCBI-ProteinID:
XP_062286372
LinkDB
All DBs
Position
12:complement(5746233..5749295)
Genome browser
AA seq
305 aa
AA seq
DB search
MKILIAVVLSVLAVGASACTCNSMKWATCDGTPCACSVLIGENNPQKLDCTKLIPKCFLM
KAEMYRAKKGLSTRTGIGGKPVETAFVDNDGIYDPECENDGKFKAKQCNNTEECWCVNSA
GVRRTDKGDKNLKCEKLVETMWVRIQLKHKEVKDKMDEAGLKTAIADAINARYGFKKDLV
KEVQYDPKARLIVVDVKKEKGDRVNDLTQMAYYMEKDVKVLPLFMDQKKFEPKVGAQTLE
MENILVYYVDEEAPTFTMKNLSGGIIAVIVVVVLAVVAGLLVLFFARRRQQQKYNKAQQR
EMEPM
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttgattgctgtcgtgctctccgtgctcgcggtgggagcttcagcctgtact
tgtaattctatgaagtgggccacctgtgatggaactccatgtgcttgttctgtcctgatc
ggtgaaaataatccacaaaagctggactgcaccaaattgatccccaagtgcttcctgatg
aaagctgagatgtacagagccaagaagggccttagcacccgtacgggaatcggaggaaag
ccggttgagacggcctttgtggacaacgatggtatttacgatccggagtgcgagaacgac
ggcaaattcaaggccaagcagtgcaacaacaccgaggaatgttggtgcgtcaacagcgcc
ggtgtccgccgtactgacaagggagacaagaacctcaagtgtgagaagctggtggagact
atgtgggtccgtattcagctgaaacacaaagaagtgaaagataaaatggatgaagctggg
ttgaagactgccattgcagatgccatcaacgctcgttacggcttcaaaaaggacctggtg
aaggaggtgcagtatgaccccaaggcccgcttgattgtggtggatgtgaagaaggaaaaa
ggggaccgtgtgaacgacctgacccaaatggcctactacatggagaaagatgtgaaagtg
ttgcccctgttcatggaccagaaaaagttcgagcccaaggtgggcgcccagaccctggag
atggagaacatcctggtgtactacgtggacgaggaagccccgacttttaccatgaagaat
ctgtcgggtggcatcatcgccgtcatcgtggtggtggtgctggccgtggttgccggcctg
ctggtcctgttctttgccagaaggagacagcagcagaagtacaacaaagctcagcaaaga
gagatggagcccatgtaa
DBGET
integrated database retrieval system
