KEGG   Scomber scombrus (Atlantic mackerel): 133991832
Entry
133991832         CDS       T10651                                 
Name
(RefSeq) protein bicaudal C homolog 1-like
  KO
K18756  protein bicaudal C
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133991832
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133991832
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd DUF5324 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 133991832
NCBI-ProteinID: XP_062286390
LinkDB
Position
12:complement(19005929..19062338)
AA seq 975 aa
MAAQCDTISGYLQQSDHGSNSERSTDSPLPGSEEDLSGPHPLPDPEWTEERFRVDRKKLE
VMLLAASEGRVNGGEDFFQKIMDETQTQIAWPSKLKIGAKSKKDPHIKVCGKRENVREAK
DRIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKRVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPGGVEAARVKIRELLPLVLSFELPAIMQSDPSSPTVQHISQTYNLTVSFKP
PTRLYRATGVVRGSQNNANAVKRGTALLLEHLAGSLASTISVSTYLDIAPQHHLFMKGRN
GSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKED
IEVEPHCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKYLLGLESNGVS
SSSPSVVLNTATNQSPSLICPVGLDILASAGLGLSNLGFLGATAAHSLANSAAPNAVLNS
LNSSMSPLQTPSPSTPTPSPSLWPSPLTNTQGFSSQLMLHPATQATLSSILLSGVQGYTQ
STPSPPPGLAPIDKQPNGVPDCTKGPCTLNGVVKHPGSVYGRIATASLAETVLSPAPCDS
VQEASGHNPSEPLSSKSSPDEGSDTFVEVGMPRSPSHSANGSELKQMLASCKTSSGKRQA
VELLQGTKNSHLHSDCLLSDAESSSSDSPVADKRAPGSERAAERAAQQNERERIRLAPQT
SFANMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHV
PYKPSMSTTYEGSPLSLSRSSSREGVGNGSDSDNWRERNGTGNGLPSHTEFPTAVSSPKR
KQNKSVAEHYLSSSNYMDCISSVTGSNGCSLNSSLKGSDLPELFSKLGLGKYTDVFQQQE
IDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPIRSSFLEGGASGRL
SRQFHADMASVSGRW
NT seq 2928 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgacactataagcggatacttgcagcagtcggaccatggctcaaac
agcgagcgcagcaccgactctcctctcccgggatcagaggaagatctgagcggaccccat
ccgctaccagacccggagtggactgaggaaaggtttcgagtggaccgcaagaagttagaa
gtcatgttattagctgcctctgaggggagagtcaacggaggggaggatttctttcagaag
atcatggatgagacccaaacacagatagcctggccatccaaactgaaaatcggggccaag
tctaaaaaagatcctcacatcaaggtgtgcgggaagagggagaatgtgagggaagccaaa
gacagaattatgtctgtgcttgacacaaagagtaacagggtaactctgaagatggatgtc
tcccatacggagcactcccatgttattggcaaaggtggcaacaacatcaagagagtgatg
gaggagactgggtgccacatccatttccccgactctaacaggaacaaccaggcagagaaa
agcaaccaggtgtccatcgcagggcagccaggaggggttgaggcagctcgagtaaaaata
agggagctgctccctctagtgctgtctttcgagcttccagccatcatgcagtctgacccc
agctcacccaccgtgcagcatatctcgcagacctacaacctcacagtctccttcaagccc
ccgacacgcctgtatagggcgactggtgtggtccgtggctcacagaataacgccaacgcc
gtcaagcggggtacagctttgctgttggagcacttggctggtagcctggcgagcaccatc
tcagtctccacctacctggatatcgccccccagcaccacctcttcatgaagggacgcaat
ggcagcaacatcaagcacatcacccagaggacaggagcccagatccacttccctgacccc
aacagcccccaaaagaaatccacagtctacatccagggcaccattgaatcggtctgcctg
gcacggcagtacctcatgggctgcttgcctctggtgcttatgttcgacattaaagaggac
attgaggtggagccccattgtatcacagcactaatggagcagctggatgtcttcatcagt
atcaaacccaagccaaaacagcccagcaagtctgtgatagtcaagagtgtggagaggaat
gcagtgaacatgtacgaagcccgaaaatacctattgggtctcgagagcaatggggtgtct
tcctcctcaccatctgtggtgttgaataccgccaccaaccagtccccgtccctcatctgc
cccgttggcctggacatcctggcctcagctggcctggggctgagcaatctgggttttctg
ggtgcgacagcagcccattccctcgccaattctgctgccccaaacgctgtcctcaacagc
ttaaactcctccatgagccctctgcagaccccaagcccaagtacacccactccctcccct
tccctctggcccagtccactcaccaatacccaaggcttctcatctcaactaatgctgcac
cccgctacccaggccaccctgagtagcatcctgctgtcaggcgtacagggttacacacag
agtacaccatctcctccacctggcctggcccccatagacaagcagcccaacggggtccct
gactgcaccaagggcccctgcactctcaacggtgttgtcaagcaccctggctcagtctat
gggaggatagcaactgcatcacttgcagaaactgtcttgagtccagccccatgtgactcg
gtgcaggaggccagcggacacaatccatcagaaccgctgtccagcaagtccagcccagat
gaaggctctgacacatttgtggaagtgggcatgcccagaagcccctctcactcggccaac
gggagtgagctgaagcagatgctggcttcttgtaagacgtcatcagggaagcgacaagct
gtggagctcctgcagggcaccaagaactcccatctacactctgactgtctcctttctgac
gctgagtccagttcatcagacagtcctgtagctgataagagggcaccaggtagtgagcgg
gcagctgagagggcagcacagcagaacgagagggagagaatcagactggcaccacagaca
tcctttgccaacatgcaggcatttgactatgaacaaaaaaagctgctagcaaccaaagct
atgttgaagaagcctgtggtgactgaggtgcggacccccaccaacacttggagtggtctt
ggtttctcaaagtcgatgccagccgagacaatcaaggagttgcggagagccaatcatgtc
ccatacaagcccagcatgagcaccacctacgagggttccccactgtccttgtctcgatcc
agcagcagggaaggcgtgggaaacggcagtgactccgacaactggcgagagaggaacggc
actggtaacggtctgccgagccacaccgagttccccactgctgtcagcagcccaaagagg
aagcagaacaaatctgttgcagagcattatctcagcagcagcaattacatggactgcatc
tcttcagtaaccggcagcaacggctgcagcctgaactcatctctgaaaggttcagacctg
cctgagctcttcagcaagctgggcttggggaagtacacagacgtcttccaacaacaagag
attgacctccagacattcctaactctaacagaccaggacctgaaggaattgggcatcact
acctttggagcccgcaggaaaatgctgctcgccatctcagaactcaataaaaaccggagg
aagctatttgagccacccatcagatcctcctttctggaagggggagcgagtggtcgcctc
tcccgtcagtttcatgcagacatggccagcgtcagtgggcgatggtag

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