Scomber scombrus (Atlantic mackerel): 133991844
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Entry
133991844 CDS
T10651
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133991844 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133991844 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133991844 (cdh5)
04090 CD molecules [BR:
ssco04090
]
133991844 (cdh5)
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Major cadherins
133991844 (cdh5)
CD molecules [BR:
ssco04090
]
Proteins
133991844 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
133991844
NCBI-ProteinID:
XP_062286407
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All DBs
Position
12:complement(24297852..24331607)
Genome browser
AA seq
783 aa
AA seq
DB search
MMAWLRLWTTGLMAIMALSVSLGISEDSGLSVVDAKKQGPAEIVRKENYPVLFRQKREWI
WNSYYVEEEKPGSGPERIGKLKSSKDATVRRFEIIGEGANDIFTVDEKGDLFVTRSLDRE
EKAIYHLKARILDGNGRVIEDTGEFVVQVTDINDNVPVFSTFNGSVMERSPVGTRVVEVK
ATDADDPTTRNGDLRYSLIQEGDHAAFDIDSLTGVIICNTNKLDRETKSHYVVVVQARDM
GGMATGSTATTSVKITILDANDNLASFTQRTFDLVVPEDRKLNEVIGTLKLDDKDQIQNK
EPIFTISDENSKKTFGTALSPEKDGQLILKQALDYETKDSYTFTVQVQENLRYTADNEAT
AIKTAKVNIKVLDVDEPPEFSQHSYNFTVREESMVNNIGKITARDPDRANNEIRYSISDK
NCPIQIDPITGQLSTLRTLDREVVAKHMFQVKAQEEPSGLESFVKVNIIVQDINDNPPEV
IAEDIYLCDSDKTGMVIGLLRAADKDDQPAKFRFSLASESSNFSIKDHGNNTAAIVVVQG
PFSMDDPRDYSVDVSISDNGIPVLTSRTKVVIKVCQCDAQRNVLFCKALAQRMGVSVHAL
IAILLCILTILVIVILFVLRKRYQKDSLASMKNCGEIHEQLVTYDEEGGGEMDTNGYDVS
ILTSACNDGSLLRHPDRLPHPSLYAMVQKPTQHTQPTACKGDMAAMIEVKKDEADHDRDG
IPYDTLHIYGYEGPESLAGSLSSLNSASTGSNMDYDFLNDWGPRFKPLAELYGVDGPDYY
NQY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttggcttcggctgtggactacagggcttatggccatcatggccttgtccgtc
tctctcggcatctctgaagactcaggcctttctgtggtggatgccaagaagcaaggaccc
gctgagattgttaggaaggagaactatcctgtcctgttcaggcagaagagagagtggatc
tggaattcatactatgtggaagaggagaaacctggctcaggccccgaaaggataggaaag
ctgaagtcaagtaaggatgcgacggtcaggaggtttgaaataataggtgaaggagcaaac
gacatcttcacagtggatgaaaaaggagacctgtttgtaaccaggagtctagacagagaa
gagaaggccatataccacttaaaagccaggatactggatgggaacggcagagtgattgag
gacactggagaatttgtcgtccaggtgacagatattaatgacaatgtccccgttttctcc
acgttcaatggatccgttatggagaggtctccagtgggaactagagtagtcgaggtaaag
gcgaccgatgccgatgaccccaccactcgtaatggcgatttgaggtactccttgatccaa
gaaggagaccatgctgcttttgacatcgacagtctcacaggtgtgatcatctgcaataca
aataagctggatcgggaaaccaagagtcattatgtggtggtggttcaggctagggacatg
ggaggaatggccacaggcagcacagccaccacctctgtcaaaatcaccatcttagacgcc
aacgacaacttagcgtctttcacccaaaggacatttgatttggtagttccagaggaccgc
aagttgaatgaggtcattggcactctgaagttggacgacaaagatcagattcaaaacaaa
gagcccatcttcaccatttccgatgaaaatagtaaaaaaacctttggtactgcactcagc
cctgaaaaggacggccaacttatactcaagcaggctctggactatgagacaaaggacagc
tacacctttaccgtccaggtgcaagaaaacctgcgatatactgctgacaacgaagccact
gctatcaagacagctaaggtaaacatcaaggtgttggacgtagacgagccgccagagttc
tcccagcacagctacaatttcactgtgagggaagaatcaatggtgaacaacattgggaaa
atcacagccagagatcctgacagagccaacaacgagatacggtattccatctcagacaag
aactgtccgattcagatcgacccgatcacaggtcagctgtccaccctgaggactctggac
agagaggtggtggccaaacacatgtttcaagttaaagcgcaggaggagccaagtggtttg
gagtcatttgtaaaagttaacattatagttcaggacatcaatgacaacccgcctgaagtg
attgcagaggatatctacttatgtgacagtgacaaaactgggatggtgattgggcttttg
agagcggcagacaaagacgaccagccagctaaattcaggttcagcctggccagtgagagc
tccaacttctccatcaaagatcacggcaacaacacagcggctatcgtggtggtgcagggg
ccgttcagcatggatgaccccagggattacagcgtggatgtaagcatcagtgacaatggg
attcctgtcctgaccagcaggaccaaagtagtaatcaaggtgtgtcagtgtgatgcccag
cgaaatgttttgttttgcaaagctcttgctcagaggatgggagtcagtgttcatgccctg
atcgccattctgctctgcatactgaccatcctggtcatcgtgatcctgtttgtgttgagg
aaacgctaccagaaggattctctggccagtatgaagaactgcggggagatccacgagcag
ctggtcacatatgatgaggagggaggaggagagatggacaccaatggttacgatgtctcc
atcctcacttccgcttgcaacgatggatctctactccgccacccggaccgcctcccccac
ccctctctctatgccatggtccagaaacccacccaacacactcaacccaccgcatgtaag
ggtgacatggctgctatgatcgaggtcaagaaagacgaggcggatcacgacagagacggc
atcccctatgacactctgcacatctatggctacgagggaccagagtctttagctggcagc
ctcagctctctgaacagtgcctccaccggctcgaacatggattacgacttcctgaatgac
tggggtccgagattcaagcccctggccgagctgtacggggtggatgggcctgactactac
aatcaatactaa
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