Scomber scombrus (Atlantic mackerel): 133991860
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Entry
133991860 CDS
T10651
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a isoform X1
KO
K19472
homeobox protein SIX2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133991860 (six2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
133991860 (six2a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
CBP1_cbp8
DUF4820
YdaS_toxin
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
133991860
NCBI-ProteinID:
XP_062286432
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Position
12:complement(21183329..21186245)
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AA seq
292 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYRENNENSNSNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDHTSQSPALLLSS
NAGLQSLHGLAPPPGPSAIPVPSGADSVHHHHSLHHDTILNPMSSNLVDLGS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcttccgacgtttggttttacgcaggaacaagtggcgtgtgtctgcgaagtc
ctccaacaaggggggaacatcgagcggctggggcgcttcctttggtcgctcccagcgtgc
gaacacctccacaaaaatgagagcgtcctcaaagcgaaagcagtggttgccttccaccgg
gggaacttccgagagctctacaaaatcctggagagccaccagttttcgccgcacaaccac
ccgaagctgcagcagctgtggctcaaagcgcactacatagaggcggagaagctgagaggc
cgtccgctcggcgccgtggggaagtaccgagtccggagaaagttccccctgccccgctcc
atctgggacggtgaagagacaagctactgcttcaaagagaagagcaggagcgtcctgcgg
gagtggtatacccacaatccttacccatccccgcgggagaaaagagagctggctgaggcc
acgggactcaccaccacgcaggtcagcaactggttcaaaaaccgacggcagcgagaccga
gccgcggaggcaaaagaaaggtacagagaaaacaacgagaactcaaacagcaatagtcac
aacccattgacttcttccatgaatggaaataaaactctattgggcagctcagacgacgac
aaaacgccttctgggacgccggatcacacgtctcagagcccggctctgctcctgagctca
aacgccggtttacagtccctgcacggcctcgcgcccccgccaggtcccagcgccatcccg
gtacccagcggcgcagactcggtgcaccatcaccactcattgcaccatgacaccatactg
aaccctatgtcttctaatctggtggacctcggctcttaa
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