Scomber scombrus (Atlantic mackerel): 133991960
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Entry
133991960 CDS
T10651
Symbol
wdr11
Name
(RefSeq) WD repeat-containing protein 11
KO
K24260
WD repeat-containing protein 11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133991960 (wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133991960 (wdr11)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
Others
133991960 (wdr11)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Other cilium assembly proteins
133991960 (wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
TPR_GEMI5
RAB3GAP2_N
Beta-prop_CAF1B_HIR1
WDR54
DraK_HK_N
Motif
Other DBs
NCBI-GeneID:
133991960
NCBI-ProteinID:
XP_062286566
LinkDB
All DBs
Position
12:8421688..8474376
Genome browser
AA seq
1242 aa
AA seq
DB search
MIPYTVNIKLAARTLTGTLNLQNKTAVDWGVQGLIAQGCHSSILIIDPKTSQTIQVLEKH
KANVVKVRWSRENYYHNLSSPYCLRLASGDASGKIIVWDVVSGTAHCEIQEHSKPIQDLE
WLWNQDASRDLLLAVHPPNYIVLWNGDTGTKLWKKSYAENILSFSFDPFDPSNMALLTSE
GIVFITDFSYSKPPGSAGKKVYIASPHASPAHTKPAPAATPAPTGAKKALNKVKVLITNE
KPTTEAVTLNDCLQLSYLPSKRNHMLLLYPREILILDLELSQTVGVVAIERSGVAFVQVI
PCAQRDALYCLHENGCITLRVCRSTTVPEDTSDPEQNVQELVYDLRSQCDAIRVTKTVRP
YRMVICPINENNAALTVSDGRVMLWELKAHTGRAPTNQSSGLSPLYTPVSFCGSRLGPNQ
KRIQDLSLNSMIGQTLIAGEVPPPSSNQQEVQLKFLLTGLLSGLPLPPFALRMCPPLTTK
NINHYQPLLAIGTSNGSVLVYNLTSGLLHKELSVHSCEVRGIEWVSLTSFLSFATSAPNN
MGLVRNELQHVDLPTGRCFAFRGERGNDEPPIEMIKVSHLKQYLVVVFRDKPLELWDIRT
GTLLREMAKNFPTVTALEWSPSHNLKSLKKKQMAAREAIARQTVSDAEQSSVESSVISLL
QDAESKSETSQAISAREHFVFTDTDGQVYHITVEGNTVKDGARIPPDGSMGSIACIAWKG
DTLVLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMYTDGAEVWDTK
EVQMVSSIRIGRNVNYRILDIDWCTSDKVVLASDDGCIRVLEMAMKSASYRMDEQDLTDS
VWCPYLLMPRASLTLKAFLLLQPWSGTFTMDITQVDYNEKVEIKGLIQEQLNSLSNDMKS
VLLDPELSLLQRCLLVSRLFGDESDLNFWTVASHYLQSFAQARQLSLSAAEGQAQNEGTQ
QSPHNHLDICHDVLCESSYFQKFQLDRVHLQEVKRSSYEHTKKCADQLLLLGQTDRAVQL
LLETSADNSSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKA
ADACRYLQTYGEWNRAAWLAKVRLNPAESSDVLKRWAEHLCSPQVNQKSKAIMVLLSLGC
FYKVGEMLHSMRYFDRAALFIEACLKYGLMEANDSSNKLIEAAFLDYARLLRQLGLREGA
ALWASRAGSAGEQLMEELFQGEGGVAEAPGEEEVELCKESTE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgattccttacactgtcaacatcaaactcgcggctcggacgttgactggcactctcaat
ttgcagaataaaaccgctgtagattggggtgtgcaggggctgatagcgcagggatgtcac
tccagcattcttatcatcgatccaaagacgtcccagaccatacaggtgttggagaaacac
aaagccaacgtggtcaaggtgagatggtccagagaaaactactaccacaacctgagctct
ccctattgtctccggctggcttcaggagacgcctctgggaagataatagtgtgggatgtg
gtcagcggcactgcccactgtgagatccaggagcactccaaacctatccaagacttggag
tggttgtggaaccaggatgcgtcccgtgatctgctgttggccgtccaccctcccaactac
atcgtgctgtggaacggggacacgggcaccaagctgtggaagaagagctacgctgagaac
atcctctccttttcatttgacccctttgacccctccaacatggcattgctgacgagcgaa
gggatagtcttcatcacagacttttcatactccaaaccaccaggcagcgccggcaaaaag
gtctacatcgccagcccccacgcaagccccgctcacaccaagcctgcacctgctgctact
ccagcccccactggagctaagaaggccctcaataaggttaaagtgctcatcaccaatgaa
aaacccaccactgaggcggtgacgctgaacgactgtctgcagctgtcctacctgccatcc
aagaggaaccacatgctgctgctttatcccagagagatcctcatcctggacctggagctc
agccagacagtgggcgtggtggccatcgagcgctccggagtggccttcgtccaggtgatc
ccatgtgctcagagggacgccctgtactgtctccatgagaacgggtgcatcacccttcga
gtgtgtcgctccactactgttcctgaagacacatcagatccagagcagaatgtgcaggag
cttgtgtacgacctgcgctctcagtgcgatgctatccgagtcaccaagacagtccggccc
tatcgcatggtcatctgccctatcaacgaaaacaacgctgctctcacggtcagcgacggc
agggtcatgttgtgggagctaaaagcccacactggcagggctcccaccaatcaaagttcg
ggtctgtcgccactctacacccctgtgtcattttgtggatctcggctgggtccaaaccag
aaaaggattcaggatctctctctcaacagcatgatcggtcagaccttgattgctggtgag
gttcctcctccatcgtccaaccagcaagaagtccagctgaagtttttgctcactggccta
ctgtctggtctgccgctgccaccgtttgccctccgcatgtgtccaccacttaccaccaag
aacatcaaccattatcaacccctgctggctattggcaccagtaatggctctgtgctcgtc
tataatctcaccagtggtcttctgcacaaggaactcagtgtccactcttgtgaagtcagg
ggtattgaatgggtgagtctcaccagtttcctatctttcgccacttctgctcccaacaac
atgggcctggtgcgaaacgagctgcagcacgtcgacctgcctactggcaggtgctttgca
ttcagaggcgagcgaggaaacgatgagccacccatagagatgattaaagtgtctcatctc
aaacagtacctggtggtggtgttcagagacaaacccctggagctgtgggacatcaggacg
gggacgcttctccgagagatggctaagaacttccccaccgttactgcgctggagtggtcc
ccatcgcacaacctgaagagtctgaagaagaagcagatggcagcgagggaggccattgct
cggcagacggtttcagatgcagagcaaagtagcgttgaatcctcagtcatcagcctcctc
caggacgcagagagcaagtcagagacgagccaggccatctcagccagggagcattttgta
ttcactgacacagacggccaagtctaccacatcaccgtggagggaaacacagtcaaagat
ggtgcaagaatccctcctgatggtagtatggggagtatcgcctgcattgcctggaaaggt
gacactctggtgctcggagacgtggatggcaatctcaacttctgggacctcaaagctcgt
ttatccaggggaataccaacacaccgtggctgggtgaagaaaattcgttttgcaccaggg
aaaggcaaccagaaacttctggtcatgtacacggacggagcagaagtctgggacaccaaa
gaggtccaaatggtcagcagcatacggatcggtcgcaacgtgaactaccgcatcctagac
atcgactggtgcacgtcagacaaagtcgtgctggcctcagacgacggctgtatccgagtg
ctggagatggccatgaagtctgctagctaccgtatggatgaacaagacctcaccgattct
gtgtggtgtccttacctgctgatgccccgagcttctctcaccctcaaagctttcctcctg
ctgcagccctggtcaggaaccttcaccatggacatcactcaagtagactacaatgagaaa
gttgagataaaaggtctgatccaggagcagctcaactctttgtctaatgatatgaagagt
gtgctactggacccggagctcagcctgctgcagcgctgcctcctggtgtcacggctgttt
ggggacgagtcagacctcaacttctggacagtagcgtcccactacctccagtctttcgcc
caggctcgtcaactcagcctgtccgcagccgagggtcaggcccaaaacgaagggacccag
cagtcacctcacaatcatctggacatctgccatgacgtcctgtgcgagagttcttacttc
cagaagttccagttggatcgagttcacctgcaggaggtgaagcgctccagttatgaacac
actaagaaatgtgctgaccagctcctcctgctgggacagacggaccgggcagtgcagtta
ctgttggagactagtgcagacaactccagctactactgtgattcactcaaagcctgcctc
gtgaccaccatcacctcctcaggcccgtcccagtccaccatcaaactggtggccaccaac
atgatcgccaacggcaagctagcagagggagtacagctgttgtgtttgattgacaaggcg
gcggatgcttgccgctacttgcagacctacggggagtggaaccgcgctgcttggctggct
aaggtgcgtctgaacccggcagagagctcagacgtgctgaagcgatgggcagaacatctg
tgctctccacaggtcaaccaaaagtccaaagccatcatggtgctgctctctctgggctgc
ttttacaaagtaggagagatgcttcacagtatgaggtactttgatcgcgccgccctcttc
atcgaagcctgtctgaagtatgggctgatggaggccaacgactcttccaataagcttatt
gaggctgcatttttggactatgcacgtctgctccgccagctcggcctgcgggagggagct
gctctgtgggcgtcgcgggccggcagcgctggggagcagctgatggaggagctgttccaa
ggagagggaggtgtggcagaagcccccggcgaagaggaagttgagctgtgcaaggagagc
accgagtga
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integrated database retrieval system
