Scomber scombrus (Atlantic mackerel): 133991966
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Entry
133991966 CDS
T10651
Symbol
opn3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133991966 (opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133991966 (opn3)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133991966 (opn3)
G protein-coupled receptors [BR:
ssco04030
]
Rhodopsin family
Vision
Opsin
133991966 (opn3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
133991966
NCBI-ProteinID:
XP_062286574
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Position
12:complement(7178054..7186282)
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AA seq
384 aa
AA seq
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MNPANETSADRSAEQYIFAVGTYKLLAFTIGTIGVFGFCNNVVVILLYCKFKRLRTPTNL
LLVNISLSDLLVSLIGINFTFASCVKGGWIWSQATCMWDGFSNSLFGIVSIMTLAALAYE
RYIRVVHAQVVDFPWAWRAISHIWLYSLAWTGAPLLGWNRYTLEIHRLGCSLDWASKDPN
DASFILFFLLGCFFVPVGIMIYCYGNILYTVQMLRSIQDLQTVQIIKILRYEKKVAVMFL
LMISCFLVCWTPYAIVSMMEAFGRQSMVSPTVAIIPSFFAKSSTAYNPLIYVFMSRKFRR
CLLQLLCSRLSWLQRNLKERPLAPVERPIRPIVMSGTRDRPKKRVTFSSSSIVFIITTDD
FRRLDVTSKAGDSSEVNVIQVRPL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgccaacgaaaccagcgctgacagaagtgcagaacaatatatttttgcagtt
ggcacctacaaacttctggcttttaccatcgggactattggagtgtttggcttctgcaac
aacgttgttgtcatcctactttactgtaaattcaagaggctgcggacgcccaccaatttg
ttactggtcaacataagtttaagtgatcttctagtttctctgatcggaataaactttacc
tttgcttcgtgcgtcaaaggaggatggatttggagccaggcaacatgcatgtgggacggc
ttcagcaacagcttatttggcatcgtctccatcatgactctggcagccctggcctatgag
cgatacatccgggtggtccacgcccaggtggtggactttccctgggcgtggcgggccatc
tcccacatctggctgtactctctagcctggacgggggctccactcctgggctggaaccga
tacactctggagatccaccggctgggctgctcgctggactgggcatctaaggatccaaac
gatgcttctttcatcctcttcttcctccttggctgtttctttgtgcctgtgggcatcatg
atctactgctatgggaacatcctctacacagtgcaaatgctacgctccatacaggacctc
caaacggttcagatcatcaagatcttgcgctacgagaagaaggtcgccgttatgtttctt
ctaatgatctcctgcttcctggtgtgttggacaccctacgctattgtgtccatgatggaa
gccttcggcaggcagagcatggtctctcccacagtggccatcatcccttcattctttgcc
aagtctagcacagcctacaaccccctcatctatgtattcatgagtcgaaagttccgccgc
tgtttgctgcagctgctctgttcgaggctctcttggctgcagcgaaatctcaaagagcgc
cccctggctccggtcgaacgccccatccgaccgatcgtcatgtcaggcaccagggaccga
cccaaaaagagagtgaccttcagctcctcgtccatcgtcttcatcatcaccaccgacgat
ttccgccgattggacgtgacctccaaggctggagattcctcagaggttaatgtcattcaa
gtgaggccattgtga
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