Scomber scombrus (Atlantic mackerel): 133991984
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Entry
133991984 CDS
T10651
Symbol
sptlc3
Name
(RefSeq) serine palmitoyltransferase 3
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00600
Sphingolipid metabolism
ssco01100
Metabolic pathways
ssco04382
Cornified envelope formation
Module
ssco_M00094
Ceramide biosynthesis
ssco_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
133991984 (sptlc3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133991984 (sptlc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssco01007
]
133991984 (sptlc3)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
133991984 (sptlc3)
Amino acid related enzymes [BR:
ssco01007
]
Aminotransferase (transaminase)
Class II
133991984 (sptlc3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Aminotran_5
UPF0154
Motif
Other DBs
NCBI-GeneID:
133991984
NCBI-ProteinID:
XP_062286600
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All DBs
Position
12:10048431..10069468
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AA seq
548 aa
AA seq
DB search
MARTAADGNLKPNSNQNGLKCEDVKKNGYHRSEKYVPGSGVASRQHRLESFEQAPMYVAV
MTYLGFGIVTLFGYLRDLLRAVGLEKCHVAQERVEQKDFIPLYQDFENFYTRNLYMRVRD
NWNRPICSLPGPVFDLMERVSDDYNWTFRLTGKTIHSVINMGSYNYLGFAENNADFLKTV
ADKVHQYGVGVCSTRQEIGNLDIHEELEQLVANFLRVESSMTFGMGFATNSMNIPALVGK
GCLILSDEVNHTSLILGARLSGATIRVFKHNNMHSLEKMLREAVCSGQPRTHRPWRKILI
MVEGIYSMEGSVVRLPEIIALKKKYKAYLYLDEAHSIGAVGPTGRGVTELFDVNPADVDV
MMGTFTKSFGAAGGYIAGKKELVNYLRSHSHSGVYASAMSPPVTEQIIRAMKCIMGIDGN
SEGIRRIRQLAENTRYFRARLKKMGFIIYGHDESPVVPVLLYMPGKVVAFSREMLQRKIG
VVVVGFPATPITEARARFCVSAAHTRAMLDQVLHHMNEVGDTLCLKFSRQKYSPCTDLYG
ETDFELDS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaacagctgctgacggcaacttaaaaccaaattcaaaccagaatggactgaaa
tgtgaagatgtcaagaaaaatggctatcacaggagtgagaaatatgttccagggagtgga
gtcgcctccaggcagcacaggctggagtcctttgaacaggcgccaatgtacgtggctgtg
atgacatacctgggatttggtattgtcaccctgtttggctacctcagagacctcctcaga
gctgtgggcttagagaagtgccatgttgcccaggaaagagtggaacagaaggatttcata
ccactttatcaagattttgagaacttctacactcgaaacttgtacatgagagtacgagac
aactggaaccgtcccatatgcagcctgccaggacctgtctttgaccttatggagagagtt
tctgatgactacaactggacgttcagattaaccgggaagacaatacacagtgtcatcaac
atgggctcctacaactaccttggttttgctgagaacaacgctgatttcttgaaaactgtg
gcagacaaagtgcaccagtatggggtgggggtttgcagcacaaggcaggaaataggtaac
ctcgacatccacgaagagctggagcaactagtggctaatttcctgagagtagagtcctcc
atgacttttgggatgggttttgccaccaactcaatgaacattccagcacttgtgggcaag
ggctgtttgatactgagtgatgaggtcaatcacacctctcttatcttaggggctagactc
tcaggggcaaccatccgggtgttcaaacacaacaacatgcacagtctggagaagatgcta
agggaggcggtttgctcagggcagcctcggacccacaggccctggaggaagatcctcatc
atggtggaaggcatctatagcatggagggctcagtggtgcgacttcctgagatcatcgct
ctgaagaaaaaatataaagcgtatctgtacctcgatgaggcccacagcattggagcagtg
ggacctacagggaggggcgtgaccgagctgtttgatgtgaacccagctgatgtggatgtg
atgatgggcaccttcaccaagagctttggggctgctggaggctacattgcagggaaaaag
gagctggtgaactacctgcgcagccattcacatagtggagtatacgcctcggccatgtct
cctcctgtcactgagcagatcatacgggcaatgaagtgcatcatgggaatagacgggaat
tcggaaggtattagacggatccgccaactggcagagaacacaagatacttcagggccaga
ctgaagaagatgggcttcatcatctacggccatgatgaatcacctgtggttccagtccta
ctctacatgccaggcaaagtggtggctttctcacgagaaatgctgcagaggaaaattggt
gtagtggtagtcggctttccagccacgccgattacagaagcccgagctcgtttctgtgtg
tctgcagcacacaccagagccatgctggaccaggtgcttcaccatatgaacgaggtggga
gacactctctgtctgaagttctcacgacagaaatattccccctgtactgacctctatggc
gagacagactttgagctggacagctga
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