Scomber scombrus (Atlantic mackerel): 133992100
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Entry
133992100 CDS
T10651
Symbol
zranb1b
Name
(RefSeq) ubiquitin thioesterase zranb1-B
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133992100 (zranb1b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133992100 (zranb1b)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133992100 (zranb1b)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C64
133992100 (zranb1b)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
133992100 (zranb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
133992100
NCBI-ProteinID:
XP_062286772
LinkDB
All DBs
Position
12:complement(18295075..18323313)
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AA seq
761 aa
AA seq
DB search
MTELVAKWACEYCTYENWPSAIKCTMCRAQRPSGGAIITEEPFKSSPALDASLHQWDPAG
LSNSPSQGGSSLLICPDSSARPRVRIADVPETSSKWSCQMCTYLNWPRAIRCTQCLCQRQ
QAQQQQHGQHATHQGHHTQQPRSPTESPQTSGSGCRPAPSTTTTDPCEEYNDRNRLNTHS
QHWTCTACTYENWSKALKCVVCDHPRPNSLLAEPIELASEPESQQTSSKLNEQDRDNRRG
VVGHVVGQGVVGVVGGVGGCSSSQRRSPPTSKRESEVNMDFQRIEVASGAGIGSKEELEV
DFKKLKQIKNRMRRTDWLFLNACVGVVEGDLAAVEAYKSSGGDIARQLTSDEVRLLNRPS
AFDDGFTLVHLAIRFQRQDMLAVLLTEVSQQAAKCIPAMVCPELTEQIRREVAASLHQRK
GDFTCYFLTDLVTFTLPADIEDLPPAVQEKLFDEVLDRDVQKELEEESPIINWSLELGTR
LDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKTLHDSLHDCSHWFYTRWKEWESW
YSQSFGLHFSLREEQWQEDWAFILSLASQPGSSLEQTHIFVLAHILRRPIIVYGVKYYKS
FRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGFDNRGAGANLN
TDDDVTVTFLPLVDSERKLLHIHFLSAQEMGNEEQQEKLLREWLDCCVTEGGVLVALQKS
SRRRNHPLVTQMVEKWLDGYRQIRPCASLSDGEEEEDDDDE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctggttgccaagtgggcctgtgaatactgcacatacgagaactggccgtca
gctatcaagtgcaccatgtgccgtgcacagaggcccagcgggggtgccatcattactgag
gaacccttcaagagtagccctgctctggatgccagtctacatcagtgggaccctgcaggc
ctaagcaacagcccatcccaggggggctccagcttacttatttgtccggactccagtgct
cgaccccgtgtgcgcatcgctgatgtacctgaaacgagtagcaagtggtcctgccaaatg
tgcacctacctgaactggcctcgtgccatccgttgcacgcagtgcctgtgccagaggcaa
caggctcaacagcagcagcacggacaacacgcaacccatcaaggacatcatacccagcaa
ccacgcagccccacagagtcaccccagacctcaggttctggatgccgccctgctccctca
accaccactacagacccctgtgaggaatataatgaccgtaacaggctcaacactcattca
cagcactggacctgcactgcctgcacttacgagaactggtccaaggcactcaaatgtgtc
gtgtgcgaccaccccaggccgaacagcctgctagctgaacccatcgaactggcatcagaa
cctgagagccaacaaacttcttcaaaacttaacgaacaggacagggacaacaggaggggt
gttgttgggcatgtggttggacaaggggtagtgggtgtggtaggtggggtggggggttgt
agcagcagtcaaaggaggtctcccccgacctcgaaacgggagtcagaggtgaacatggac
tttcagaggatcgaagtggcatcaggggctgggattgggagcaaagaggagctggaggtg
gatttcaaaaaactgaagcagattaagaacaggatgagaaggactgattggctgttcctc
aatgcctgtgttggtgtggtggaaggtgatctggcagctgtggaggcttacaagtcgtca
gggggtgacatcgccaggcagttaacgtcagacgaggtgcgccttttgaatcgtccctct
gcattcgatgacggcttcacgctggttcacctcgccatccgcttccagagacaggacatg
ctggctgtgctgctcactgaggtgtcccaacaggcagccaagtgtatcccggccatggtg
tgtcctgagctaacagagcaaatccgtcgtgaggtagcggcctctcttcaccagcgaaag
ggagacttcacctgctatttcctcaccgacctagtgacattcactctacctgcagacatc
gaggacttacccccagccgttcaggaaaaactctttgatgaggtgctggaccgagatgtg
caaaaagaactcgaggaagagtctcccatcattaactggtctctggagctcggaacgagg
ttagacagccggctgtatgccctgtggaaccggacagctggggactgtctgctggactct
gtgctgcaggctacatggggcatctacgacaaggactcagtgttgcgcaagaccctccac
gacagcctgcacgactgttctcactggttttacacgaggtggaaggagtgggaatcgtgg
tattcccaaagtttcggcctgcacttttcactgcgggaagaacagtggcaggaagactgg
gctttcatcctctcgctggcaagtcagccgggatccagcttggaacagacccatattttc
gttcttgcacacatacttcgaaggccaataatcgtctacggagtgaagtattacaaaagt
ttccgtggggagacacttgggtacacccgttttcaaggtgtgtacttgccccttttgtgg
gagcaaagtttctgttggaagagtcccatcgcgctgggctacacgcggggccacttctca
gcactggtagccatggagaacgacggctttgacaatcgtggcgcaggcgccaacctcaac
acggacgatgacgtgacagtcacgttcctgccgctggtcgacagcgagaggaagctgctt
cacattcacttcctctcagcgcaggaaatgggtaatgaagagcaacaagagaagctgctg
cgggagtggttggactgctgtgtgacggagggtggggtcctggtggctctccagaagagc
tcccgccgtcgcaaccacccgctcgtcacccagatggtggagaagtggctggacggctac
cggcagatccgcccctgtgcctctttgtctgatggcgaagaggaggaagacgacgacgat
gagtga
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integrated database retrieval system
