Scomber scombrus (Atlantic mackerel): 133992112
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Entry
133992112 CDS
T10651
Symbol
lbx1a
Name
(RefSeq) transcription factor LBX1a
KO
K09353
homeobox protein LBX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133992112 (lbx1a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
133992112 (lbx1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
133992112
NCBI-ProteinID:
XP_062286784
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Position
12:complement(571848..573192)
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AA seq
284 aa
AA seq
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MSSKDDLKCPVLQEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHL
ISPGQKLPPAGVSGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGQDGLTFFGQRNT
PKKRRKSRTAFTNHQIYELEKRFMYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLK
RDLEEMKADVESAKSAGVVAFEKLAKLAELEKCAAGGMGGGAVTAPCNTDPDPISSRGHH
DTTDSLDSSRPHLSPTSPVSSQYTDRLSSQCCSEDEDEEIDVDD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaaagacgacttaaaatgcccggtactgcaggaggagcggaggcgcagtcct
ctggaccatctcccaccgccggccaactccaacaagccgctgactccgttcagcatcgaa
gacatcctcaacaagccgtctgtcagaaggagctactccctgtgcggagctgcgcatcta
atctctcctggacaaaagctgcccccggcgggtgtgtccggccgggcgctgctcagtcag
acctccccgctctgcgcgctggaggagctggccagcaaaaccttcaagggcctggaggtc
agcgtactgcaagctgctgagggtcaagatggtctgacgttcttcggccagaggaacaca
cctaagaaaaggcgaaagtcccgtacggcgttcaccaaccaccagatctacgagctggag
aagcgcttcatgtaccagaagtacctgagcccggcggaccgagaccagatcgcccagcag
ctcggcctaaccaacgcacaggtcatcacctggtttcagaaccggcgggccaaactcaag
cgggatctggaagagatgaaagcggacgtagagtccgcgaagtcggcgggcgttgtggcc
tttgagaagctcgccaagctggcagagttagagaagtgcgcggctgggggtatgggcggg
ggggccgtgacagcaccgtgcaacaccgatcccgacccgatctcatccaggggccaccac
gacaccaccgacagcctcgactccagcaggccgcacttgtcgcctacttctccagtctcg
tcgcagtacacagaccggctgagcagccagtgttgctcagaggatgaagatgaggagatt
gatgtggatgactga
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