Scomber scombrus (Atlantic mackerel): 133992212
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Entry
133992212 CDS
T10651
Symbol
lmbrd1
Name
(RefSeq) lysosomal cobalamin transport escort protein LMBD1
KO
K14617
LMBR1 domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04977
Vitamin digestion and absorption
ssco04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
133992212 (lmbrd1)
04980 Cobalamin transport and metabolism
133992212 (lmbrd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133992212 (lmbrd1)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
133992212 (lmbrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
TgpA_N
Motif
Other DBs
NCBI-GeneID:
133992212
NCBI-ProteinID:
XP_062286905
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Position
12:12420892..12479321
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AA seq
540 aa
AA seq
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MAAQSFLSESLLGWSIFTFILLVILAFCWVYIRKFQSRQESEVVSTITAICALAIALITS
ALLPVDIFLVSFMKYPNGTYKEWAANNETRAQIEDTVLYGYYTLYSIILFCVFLWIPFVY
FYYEERDDDNGNKCSQVKNALKYTIGFVIVCVVLLLIGAFVPLETPPGQNSTQWEKVQYL
FEELGSSHGLPALSFSISSLTLIGMLAVITYTAYGMSVLPLNLIKGTRSVMYERLENTED
IDDVEHQIEKLKSKCKDGRPLSSRDRHNLQELEGKLQVLQRRGRHLEIAERNCCTKVGSA
LRPFKVLLGIFFILVALLFTVALFISNLDKALHSAGISSGFIIFGTNLTNPLNELLLALQ
PVFPLDYILITVITMYFVLTSMAGIRHMGIWFFWIRLYKIRPKRTRPQALLFLCMILLLI
VLHTSYMIYSLAPQYVMYGSQKYLSQSQMPSADPTSGNATVAITKICDADAPEDQCIVTR
SYLFLHKFWFFSTIYYFGNWAFIGAFLVGLVVSCCRGKKSVIEGEVEADDSDISDDEYVH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcagtcgttcctctccgagtctttgctcgggtggtctattttcacctttata
cttttggtaatcctcgctttctgttgggtctacattcgtaaatttcaaagtcgtcaggag
agtgaagtcgtttcaaccatcacagcaatatgtgcactggccattgctttgataacatca
gcacttctaccagtggatatattccttgtttcgttcatgaagtatccaaatggtacctac
aaggaatgggcagcaaacaatgagacgagagcacaaattgaagacacagtgttatatgga
tattacacactttactccatcatactgttctgtgtcttcctatggatcccctttgtttat
ttctactatgaagaaagggatgatgacaatgggaacaaatgctcgcaagtgaaaaacgct
ctgaagtacacaattggatttgtcattgtctgcgtggtgctccttttaattggagctttt
gttccacttgagaccccccctggtcagaattctactcaatgggagaaagtacaatacctt
tttgaggagcttggaagtagccatggtctacctgctctgtctttctccatcagctccttg
accttgattggcatgttggcagtgatcacttacacggcatatggtatgtctgtgctgcct
ttgaatctgataaaaggcacacggagtgtgatgtatgaacgcctggagaacacagaggac
attgatgatgttgagcatcagatagaaaagctgaaatccaagtgtaaagatggacgtccc
ctgtcctcaagggacagacacaacctgcaggagctagagggcaaactgcaggtcctccag
cgcagggggagacacctggaaattgcagagaggaactgctgcactaaagtgggcagtgct
ctcagacctttcaaggtgttgttgggcattttctttatcctggttgcactgctgttcact
gttgccctgttcatttcaaatttggataaagctctccactctgctggcatcagctctgga
ttcatcatctttggcaccaacctgaccaatcctttgaatgaacttctattagccttacaa
cctgtttttccactggattatatcctgatcacagtcatcacaatgtactttgtactcaca
tccatggctggtattcgccacatgggtatatggtttttctggataaggctgtacaaaatc
agacctaaaagaacccgtccccaggctcttctctttctctgtatgattcttctcttgatt
gtccttcataccagctacatgatctacagccttgcgccacaatacgtcatgtatggcagc
cagaaatatctttcacagagtcagatgccctcagcagatcctacatctgggaacgctact
gttgccatcacgaagatctgtgatgctgacgcacctgaggatcagtgcattgtgacaaga
tcataccttttccttcacaagttttggttcttcagcaccatttactactttggtaactgg
gcctttattggggctttcctcgttggtctggtggtgtcctgctgcagggggaagaagtct
gtgattgaaggagaggtggaggccgatgactcagacataagtgatgatgaatatgtgcac
tga
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