Scomber scombrus (Atlantic mackerel): 133992275
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Entry
133992275 CDS
T10651
Symbol
mypn
Name
(RefSeq) LOW QUALITY PROTEIN: myopalladin
KO
K22028
myopalladin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133992275 (mypn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133992275 (mypn)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133992275 (mypn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Motif
Other DBs
NCBI-GeneID:
133992275
NCBI-ProteinID:
XP_062286977
LinkDB
All DBs
Position
12:complement(7927710..7943475)
Genome browser
AA seq
1866 aa
AA seq
DB search
MQENNIDQPPSISQLLRESYLAEARAQQRHSEMSRSDASSTRLQIYGSLKGKAEDSVGHN
DPQLPDLSAFLSEEELDKSVNLACQAIGHEPREEKAEVKASVTPSAPSNISSASSSTPSS
VPFVNPSPAPPAAPSAVPFTEPVPEFKELPATHTTFAVERKMHKASTQKENTVKSSRDSS
EGFNDLNRSARNTPYGPETQSKKEFLNKAADFIEELSSLFKANSSKRVRPRSCKAHRSRV
QNKSQNDGTVYPPSADNRERGVMDVEAEEEGPSPAVSHHPEVQLGSGTEHVEFQDCRITE
EEQYDSVCQEAEDAESSALTETPSYPAEPVCEPPHFIQKLKSREVPEGSKVQLDCIVRGL
PVPEVRWFCEGKELEDSPDIQIITNGELHSLIIAEAFEEDTGRYSCFASNFYGTDSTSAE
IYVEGASSSDSEVEQHFDHVAQLQRQQPTSAPSLPLSNQTISEEAEDSLSPQHIAATEEP
AEELSSLPTSQIVQEPLLPVQTTTTVLPVPEISKVSVASTAQPAQEETVVLPVQVFTTSP
PSDTETQEMSSSVPVISTQQPVQTATSVPVNSVISSVLPVQAAPTQTPQPEIQTSDHNFL
QGLNGQPIMAAPVFTKSLQDLFASEGQLVVLESRVKGVPSPRVDWYQEGKLIEDSPDFRI
LQKKPRSPAESEEICTLVIAEVFPEDSGMFTVTASNKYGTVSSTAGLRVKGNTIXNGVSN
NNHLRPFSSSMEESNQIQEAFTSDLTAPTVNVKTEITVTNSIKPHSSTIRLDPLVSSTVR
LDPLNTSTFRLDPNSSSMLRSDPLRTSLPNLEPSSLTSSSNLNSRSVSTPSLDPLYFHQD
LPGYSAARSEPQSSGQVPSYPKPFTALHVVEQEVSSPPLTSLDTSSKVKETPNHQNGTPF
VVPLPDPPPNSCLKTGNQTNHKDSRSGSRVGLRVHFKLPEDEEDERSDVSSPFENDAQAL
LSKEPPPVLAKPKLDPAQLQLLHNQVLMEQQQETEPPTQTQTHTQTQSQPPFQIQIQPEV
QSSHDDPLWPPRTHRELHQPPFQPYLNTTTPNSAPPLTTAPPAPLLSSAPTLNTTFSPLK
TSPAPPSSSLQSFPQLKTSSLVTCPPPVPQLSTASLFSSAPVTHMNTIHASHLNVSPAAL
ARTTSTPQFCSPPAPNLSTISTFSTPASQQVISPTPLLRSTHASLMNLTPTSHSFNYARP
KEFLTTQTFSPVRSPSPTESPVPRLHELAAEFNSSVASSPTPPPFSPPPRILPTRVLTSP
TSPPSLVSSPTPGSAPFLNSMFAFRAQSPPQASSPTSSSSTPSPIQNPVAFLSSVLPFLT
QSHPTNSMGLPRGAPSGVHKKMPKGRPPSIEDIRESKEIILQDIEKKLRFRDDAPTFAHQ
QKLSNEGKTASRPLGPNIPTATVISYDEVRGSSRPNHTFIYTFRQEKNVCSCDYFYVVVF
LSQEYKVSSFEQRLMSEIEFRLERTPVEESDDEVQHDDVPKGKCIAPIFDKKLKNFRAVE
GVSVTFSCKVVGIPVPKVYWFKDGKQILRKNVHYKKIREGDGTCALHIESTTNDDDGNYT
IMAANPQGRISCSGHLIVQTGPLRNRLTRSPLHVFRVRARIQEVESEQTEERFFRPHFLQ
APGDMLAHEGKLCRLDCKVSGLPNPELMWLVNGRPIYPDIYHRMLVRENGIHSLVIDPLT
QNDAGTYTCIASNKAGQSSFSLELKVVEKEMKHPPQFVEKLQNMGIPEGAPVRLECRVVG
MPPPLIYWKKDNDSIPRTKGRFSMQQDATGYVCLLIQPTTKDDAGWYTVSAKNEAGIVSC
TCRLDIYAQWHQSIPPPMKKAPRTGSRYAALTGQGLDIKSAFPTSENSPILFSSSPPEVT
LESEEL
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaacaacattgaccagccaccgtcaatctctcaactcttaagagagagctac
ctggcagaggccagagcccagcagcgccatagcgagatgagccgctcagacgcttcttcc
acacgccttcagatctatgggtcactcaaaggaaaggctgaggactctgtgggccacaat
gacccacagctcccagacctgtcagccttcctcagcgaagaggagctggataagagtgtc
aaccttgcctgccaggccatcggacatgagcctcgagaggagaaggcagaggtcaaggcc
tctgttacaccatcagccccctctaacatctcctcagcttcttcctcaacaccctcttct
gttcccttcgttaacccctctcctgctccccctgctgccccctccgctgtgcccttcacg
gagccagtccctgaattcaaagaattgccagcaacacacacaacattcgcagtagaaaga
aagatgcacaaggcctccacacagaaggagaacacggtaaaaagcagcagggactccagt
gaaggattcaatgacttgaacagatcagcaaggaacaccccatatggtccagagacccag
tccaagaaggagttcctcaacaaggcagcagacttcattgaggagctctcctctctcttc
aaggccaacagctccaaacgggtacgaccgagatcatgcaaagcccacaggagcagggtc
cagaacaagagccaaaacgatgggacagtttatccccccagtgcggacaacagggagcgc
ggtgtcatggacgtggaggcggaggaggagggacccagccctgctgttagccaccaccca
gaggtccagctgggctctgggactgagcatgtggagtttcaggactgcaggattactgag
gaggagcagtacgactcggtttgccaggaggcagaggatgctgaaagcagtgccttaaca
gaaactccctcctacccagcagagcctgtgtgtgaacctcctcacttcatccagaaacta
aaaagcagggaggttcctgagggcagcaaggttcagctagactgcattgtaagaggactc
ccagtgcctgaagtccggtggttttgtgagggtaaggagttggaggacagccctgacatt
cagatcatcaccaatggcgagctgcactctctgattatcgcagaggcatttgaggaagat
actggacgctactcctgctttgcatccaatttctatggcacagactcaacgtcagctgag
atctacgtcgaaggtgcatcctcttcggattctgaggtagaacagcactttgatcacgta
gcccagctgcagaggcaacaaccaacgtcagctccatctttacctctgtcaaaccaaact
atctctgaagaagctgaagactctttgtcacctcaacatatagcagccactgaggaacca
gcagaggagctctcctctctgccaactagccaaatagtccaagaacctcttctaccagtc
cagacaacaaccaccgtacttccagtcccagagatttctaaagtatctgtagcatccaca
gctcagcctgcacaggaggagacagtagtgttacctgtgcaggtgttcactacttcaccg
ccaagtgatacagaaacccaggagatgtcatcatctgtcccagtcatatccacacaacag
ccagtgcagacagctacatcagtaccagtgaactcagtgatctcatctgtgttgcctgtc
caggcagctccaacacaaacaccccaacctgagattcaaacctctgaccacaactttctg
caaggactgaacgggcaaccaatcatggccgctcctgtgttcacaaagagcctgcaggac
ctctttgcatcagaaggccagctggtggtgctagagagccgcgtgaaaggagtgccatca
cctcgagtggattggtaccaggagggaaaattaattgaagactctcctgatttcaggatc
ctgcagaaaaagcccaggtctccagccgaatcagaggaaatatgcactttggttattgct
gaggtctttcctgaagattcagggatgttcactgttacagcaagcaacaagtatggaacc
gtgtccagcactgcaggactaagggtcaaaggtaacactatctgaaatggcgtcagcaac
aacaaccacttgaggcctttcagcagttcaatggaggagtccaatcaaatccaagaagct
ttcacatcagatctcacagcaccaactgtcaatgtcaaaacagagattactgtgaccaac
agcatcaagccccactccagcaccattcgcctagatcctctagtgtccagcaccgtacgc
ctggaccccttaaacactagcacctttcgtttggaccccaacagctccagcatgttgcgt
tcagaccccctccgcaccagcctgcccaatctggagccctctagtctgaccagcagctcc
aacctgaactctcgcagcgtcagcacccccagcttagatcctctctacttccaccaggac
cttcctggatacagtgcagcacgttcagaaccacagagcagtggacaggtgccctcatac
ccgaagcccttcactgctctgcatgtggttgagcaggaagtgtccagtcctccgctgaca
tcacttgatacaagttccaaagttaaggagaccccaaaccatcagaatgggaccccgttt
gtggtacccctccctgacccacctcctaactcctgcctaaagacaggcaaccagacaaac
cacaaagactcacgctccggctccagagtcggtctgcgcgtgcacttcaaactacctgag
gatgaggaggatgaacgaagtgatgtatccagtccatttgaaaatgatgctcaggcactg
ctcagcaaagaaccaccaccagtgctggctaaacccaaactggacccagcccagctccag
ctcctgcacaaccaggtcctcatggagcagcagcaagaaactgaacctccaacccaaacc
caaacccacacccagactcagtcccagccaccatttcagatccagatccagcccgaggtg
caaagctctcatgatgatccactgtggccacccagaacccaccgtgaacttcatcaaccg
cctttccagccctacctgaacaccacaactcccaactctgcgcctccactgaccactgcc
ccccctgctcccttactgagctcggctccaacgctcaatacaaccttttcacctctcaaa
acgtctcctgctcctccttcaagctccctccaatcttttcctcaactgaagacctcctca
ctggtgacatgtcctcctcctgtgccacagctcagcacagcttctcttttcagttcagca
cctgtaacccatatgaacaccatccatgcctcccacctcaatgtgtcccctgcagctctc
gctagaaccacatctacaccccagttttgctctccccctgcacctaacctcagcacgatc
tccacattttcaaccccggcttcacagcaggtaatatctcccactcctctactgagaagc
acccacgcctccctcatgaacctgacccccacctcgcacagcttcaactacgcccggccc
aaagagttcctaaccacccagaccttctcaccagtcaggagtccctctccaacagaatcc
ccggtcccccggctccacgagctggctgctgagttcaactcctctgtggccagctcccca
actcccccaccattctccccgccacctagaatattacccacaagggtccttacatctccc
accagtcctccatccctggtgtcctcacccacgccgggttcagcgccattcctgaacagc
atgttcgcctttcgagcccaatcccctccccaggcctcctctcccacctccagcagctcc
acacccagccccatccagaaccctgtggctttcctcagctctgtcctgcccttcttaacc
cagagtcatcccaccaactccatgggcctgccaaggggagctccatcaggggtacacaag
aagatgcctaaggggcgccccccgtcaattgaagatatccgtgagagcaaagaaattatc
ctccaagacattgagaaaaagcttcgatttagagacgatgctccaacttttgcacatcaa
cagaagctgagtaatgaggggaaaacagcgagcagaccccttggaccaaacattcctact
gctactgtcattagctatgatgaggtacgaggatcttctcgtcccaatcacacatttatt
tatacttttagacaagaaaaaaatgtgtgtagttgcgattacttttatgtagtggttttc
ctttctcaggagtacaaagtgtccagttttgagcagagacttatgagtgagattgagttt
cgtttggaacgtacgccggtggaggagtcagatgacgaggtgcagcatgacgacgtcccc
aagggaaaatgcattgcacccatatttgataagaaactgaagaacttcagagccgtggaa
ggcgtgtcagtcactttctcgtgtaaagtagtcggaatccctgttccaaaggtttactgg
ttcaaggatggtaagcagatcttgaggaaaaacgtccattacaagaagataagagagggg
gatgggacctgtgctttacacatagagtccacgaccaatgatgacgatggcaactacacc
attatggcagctaatccacagggacgaatcagctgctcgggtcatttgatagtccaaaca
ggacctctccgaaatcgactgacacgctcacctctgcatgttttcagggtgcgagcccgc
atacaggaagtggagagtgagcaaacggaggagcgcttttttcggcctcacttcctccag
gctccaggggacatgctagcccacgaggggaagctctgcagactagactgtaaggtgagt
ggccttcccaaccctgagctgatgtggttggtcaatggaaggcctatctatccagacatt
taccacaggatgctggtacgggagaatggcatccactccctggtcattgaccctctgacg
caaaatgatgctggtacatacacctgcattgcaagcaacaaagcgggacagagctccttc
agtctagagcttaaagttgtggaaaaagagatgaagcaccctccccagtttgtggagaag
ctgcagaacatgggtattccagagggagcccctgtcaggctggagtgtcgggtggtgggt
atgccccctccactcatctactggaagaaagacaatgactccattcctagaactaagggc
agattcagcatgcaacaggatgccacaggatatgtgtgtctccttatccagccaacaaca
aaagatgatgctggctggtacacggtgtcggccaaaaatgaagctggaattgtatcctgc
acctgcagactggatatctatgcacagtggcaccagagcatccctccacccatgaagaag
gccccgcgcacaggcagccgctacgcagctctgacaggccagggtctcgacatcaagtcc
gctttccccacgtcggagaacagccccatcctgttctccagctcccctccggaggtcacg
ctagagagtgaggagctgtga
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integrated database retrieval system
