Scomber scombrus (Atlantic mackerel): 133992313
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Entry
133992313 CDS
T10651
Name
(RefSeq) neurofilament light polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133992313
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
133992313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
133992313
NCBI-ProteinID:
XP_062287014
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All DBs
Position
12:16713751..16716461
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AA seq
729 aa
AA seq
DB search
MDLTNPSIGKFNEKELLHGLNDRLAGFIKKVHQLERQNHLLEREIAEIRGKAKPASCLEQ
EYGPELGKLRQLVQDITHQKHQIEIEHENLEEELSHLRREHDKETHSRSDAESNIVILKK
DISDAYQAKLQLDKKAQSLVDEIHFLKTNHEAEVKEILHKIQDAQVTVRAHEFGSPGITA
ALRDIRAQLEGHVVSDVLKAGETFQSQFAKLTEAAETKREAIKATQQKIQEYRKRMQAKS
IALDCAKGTREALEKQLHDVQDRHKEEIIHYQNTIKELENELINCKFDMSGYLREYQDLL
NVKMALDMEIMSYRKLLCGEEARLSKMSDTPFSLPYIYHQSPVYTLPCLSRPGGPQRRVE
PQYKFVEEIITETTREIEMSEFEETGSEETEVGKDEQECTERDRRGSEEEKDNNKDSGED
RGEQVSDSQLYQVESEENVVNGDGNGDSGSPGEVDDERDKSKEESEETEAADEENNGIDK
DNQSKVDLIESLDKEENGQHQKVAENTEEEKEDATRVETVQNDFPSKPEELKPEVTLEEE
LIKKSDEDKNEDAEKADLKDSLTPAQVKKPIDKPSTQESKDLDKTQELSSNIQVKDKAHT
LASEMVEKTTDLTAEPKSTLPVETEEPSENMSKKTSGIITKSEGKEDSHSEPMDNSQAEA
LREEDKLTKNIQDVTGDGSKGQHEEPSLKSDVRSLPEVGDQKPDSGDKIQTVQTVLPGEK
TSTTAEIGE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaccaacccgtcgattggaaagtttaacgagaaagaattgctgcatggcttg
aatgatcgtcttgctggattcataaagaaggtgcaccagctggagcgccaaaatcatctg
ctggagagagaaatcgcggagatcagagggaaagcaaaacccgcatcttgtttggagcag
gagtatggaccagagctcgggaaactgagacagctggtccaggacattacacaccagaag
caccagattgaaatagaacatgagaatttggaggaagagctgtcccacttgagaagagaa
catgataaggaaacgcatagcagatcagatgcagagagcaatattgtaatcttgaagaag
gacatcagtgacgcgtatcaggctaaactacagcttgacaagaaagcgcagtctctcgtg
gatgaaatccactttctcaagacaaaccatgaggccgaggtgaaagagattcttcacaaa
attcaggatgcgcaggtgactgtcagggcgcacgaatttggcagccctggcatcactgcg
gcactcagggacatcagagcacaactggaaggtcatgtcgtgtccgacgtcctgaaagca
ggagaaactttccaatctcagtttgcaaaattaaccgaggcagcggagacaaagagagag
gcgataaaagcgacccagcaaaagattcaggagtacaggaagcgtatgcaggccaagagc
attgcactggactgcgctaaaggcaccagggaagcgctggaaaagcaacttcatgacgtc
caggatcgccacaaagaagagataattcattaccagaacacaatcaaagaacttgaaaat
gagctcataaattgtaaatttgacatgtctggttatttgcgggagtaccaggacctgtta
aatgtgaagatggctttggatatggagataatgtcttacaggaaacttctctgtggtgaa
gaagctcggctatctaaaatgtcggacacccctttctccttgccctacatctaccaccag
tcacctgtgtacactcttccttgcctgagtcgccctggaggcccacaaaggcgagtcgag
ccccaatacaagtttgtagaggagatcataacggagaccaccagggaaattgagatgtca
gaatttgaggagacaggatcagaggagacggaagtgggaaaagatgagcaggagtgtacg
gaaagagatagaaggggcagtgaggaagagaaggataataataaagacagtggagaggac
agaggtgagcaggtgtctgatagtcagctgtatcaagtagaatcagaggaaaatgttgtg
aatggagatggcaatggggatagcgggagtcctggtgaggtggatgatgaacgtgacaaa
agtaaagaggagtcagaagaaacagaagcagctgacgaggagaacaatggcatagataaa
gataatcaaagcaaagttgacttaattgagagccttgataaagaagaaaatgggcaacat
caaaaagtagctgaaaacacagaggaagagaaagaagatgcaacaagagtggaaacagtt
cagaatgatttcccttcaaaaccagaggagttaaagcccgaggtcaccttggaggaagaa
ctaataaaaaaatcagacgaagataaaaatgaagatgctgagaaggctgatctaaaagat
agtctcaccccagctcaggtgaagaagcccattgataagccttccacccaagagtctaag
gatttagacaaaactcaagagctaagcagcaatattcaagtgaaagataaggctcacacc
ttagcttcagaaatggtcgagaaaaccacagatttaacagcagagccaaagagcactctg
cctgtagagactgaggaaccttcagaaaatatgtctaaaaaaacctcaggcataataacc
aagagtgagggaaaggaagacagtcattcagagccaatggataacagtcaagctgaagct
ctaagagaggaagacaaactcacaaaaaacattcaagatgtcacaggtgatggcagcaag
ggccaacatgaagagccatcgcttaaatctgatgtaagaagtcttcctgaagtgggcgat
caaaagccagacagtggcgacaaaatccaaacagtccaaactgtgttgccaggggaaaag
actagcaccactgcagaaataggagag
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