Scomber scombrus (Atlantic mackerel): 133992348
Help
Entry
133992348 CDS
T10651
Name
(RefSeq) hyaluronan-binding protein 2-like
KO
K08648
hyaluronan binding protein 2 [EC:3.4.21.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133992348
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133992348
Peptidases and inhibitors [BR:
ssco01002
]
Serine peptidases
Family S1: chymotrypsin family
133992348
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
133992348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
hEGF
EGF_2
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
133992348
NCBI-ProteinID:
XP_062287067
LinkDB
All DBs
Position
12:complement(8671994..8676378)
Genome browser
AA seq
612 aa
AA seq
DB search
MDLKLIFFCLFLAMLFIPAELKPKHGRKHHRHHDHERRGLWRYKHGRHEKRRESFKDIIE
DYFFGITDGDDDDDDDDDVSEWLFKLQDPDGQCNPNPCENDGVCQERGWRRFKCDCPSPY
KGRRCQRGPKVCKRGRCGRGECVLTSTPPFFDCKCKLPFQPPDCRTYTLCAPNPCRNGGI
CIRDGNEYDCQCPPGFRGRFCHVGPDDCYVDEGESYRGNVSETDEGNECLHWNSHFILEK
GKDPFKSFVNPDGLGPHNFCRNPDGDLMPWCFFRRGRKLLWGFCDVDMCPEPTVEAPTGA
VPTALQPQSPEEESTEVPEPTAAKPTKTIQVPTQPSVAATQAPLKPILPQQFSTCGKSQP
KKPVTRIFGGLKVPPGAIPWQVSLQIRHKGSTQAYRHICGGTLIDSCWVLTAAHCIDKKK
DMQVVMGGLSLDLDEPTMQTLQVEEAIAHENYRETAVSVHNDIGLLRLEGNDGVCANESQ
FVKRACLPDVQLPDGIECTISGWGATEQSDFGSSHLLEANVLLINQEKCSEPKVYGGALD
GGMFCAGHLQGGVDSCQGDSGGPLTCERDTSRVIYGVVSWGDQCGKKNKPGVYTRVTHYL
NWIKSKIRAPSS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacctaaagctcatcttcttttgcctcttcttagctatgctcttcatacctgcagaa
ctaaaacccaaacatggcagaaaacatcataggcaccatgatcatgagcgaagaggactt
tggagatataaacatggcagacatgagaaaaggagagaatcattcaaggacattattgaa
gactacttctttgggatcactgatggtgatgatgatgatgatgatgacgacgatgtctca
gaatggctttttaaacttcaagaccctgacggccaatgcaacccaaacccttgtgaaaac
gatggagtgtgtcaggagagagggtggagaaggttcaaatgtgactgtccttcaccgtac
aagggaaggagatgccaaagaggtccaaaagtttgtaaaaggggtagatgtggtaggggt
gagtgtgtgctgacctcgacccccccgttctttgactgcaaatgcaagctgcccttccag
cctccagactgcagaacttatacactgtgtgcgcctaatccatgtaggaatggtggcata
tgcatcagagatggaaatgaatatgactgccagtgccctccagggttcagaggacgtttt
tgccacgttggcccagatgactgctatgtggatgaaggagagtcatatcgcggcaatgtg
agtgagacagatgaaggcaacgaatgcctccactggaactcacatttcatcctggagaaa
ggaaaggatcctttcaagtccttcgtgaaccctgatggacttggccctcacaatttctgc
agaaacccagacggagacttgatgccctggtgtttcttcagaagaggccgtaaactgctg
tggggcttctgtgacgtcgatatgtgtcctgaaccaacagttgaggcaccaactggagct
gtgcccactgccctgcagccccaatccccggaagaagaatctacagaagtcccagagcca
acggctgccaaacctaccaaaactattcaggtgcccacacaaccttctgttgcagctact
caagctcctctcaaacccatcctgccacaacaattctccacctgtgggaagtctcagcca
aagaagcccgttacccgaatatttgggggtttgaaggttcctcctggggccataccctgg
caggtgtcattgcaaatcagacacaagggctccacccaggcttacagacacatctgtgga
ggcactctcattgacagctgctgggtgctgacagccgcacactgcattgacaaaaaaaag
gacatgcaggtggttatggggggcctgtctctcgatttggatgaaccaacaatgcaaact
ttacaagttgaagaagctatcgcgcatgagaactacagggagactgctgtatctgttcac
aacgacataggcttgttgaggctggaaggtaatgacggagtctgtgccaatgagagccag
tttgtgaagagagcctgtctacctgatgtccaactgcctgatgggatagagtgtaccatt
tctggatggggtgccactgagcaatctgactttggttccagccacctgctggaggcaaac
gtactactgatcaaccaggagaagtgctctgaacccaaagtttatggcggagccctggat
ggtggtatgttctgtgctggccacctgcaaggaggtgttgattcctgccagggggactct
ggaggaccactgacttgtgagcgagacactagtcgtgttatttatggtgtggtgagctgg
ggcgaccaatgtggaaagaagaacaagccaggggtctacacacgggtcactcattacctg
aactggatcaagtcaaagattcgagcaccatcttcataa
DBGET
integrated database retrieval system
