Scomber scombrus (Atlantic mackerel): 133992364
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Entry
133992364 CDS
T10651
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133992364 (usp43a)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133992364 (usp43a)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133992364 (usp43a)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133992364
NCBI-ProteinID:
XP_062287096
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Position
2:15208334..15312930
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AA seq
1223 aa
AA seq
DB search
MDTRKESKVRKQPMKPKTTKRKEKKYKTGRFMRRKSLRSFGNFMGRILKTLGTLAHFGDA
QPPDAEDDDGGFGQSATGDCSHIPREGTVKKSSTVSSHGSVKDRLSWCYGDKTPGVLGLK
NHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDICHRRVNGEVRGQEPRIAGGEVTVQLA
SLVRALWTLDYTPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVNEDVNPSPSSS
SKTKANVKASSSLEDPSSPSSASTQQSRGRHSFVQDHFQAQYRSSLTCPHCLKQSNTFDP
FLCISLPIPLRQTRPMCVTLVFSTKGQRYLRVGLAVPLIGSLSCLRAMVAEEGKISPDQV
ILSELYSTGFQRSFADGDDLTAIADSDVIYAFQAPLLYSRGGSAPHSGYHHSLPSSPYTS
AAGPDGQRLPSSGTLSSEYLNQGGSTKVLLLICNTAGSGPQAIRFGPPFLMREDRSVSWD
QLQQSILSKLYYLMLNGSQAQNAGVLFKVRVVGGSASYSYLSPQDSRPLYHPAVDRALKF
CGPGGPPHVKVVIEWEHKIKECLFGSIQEEVVKDAESVRNQQQQHLQQHSCTLDECFQLY
TKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLSTLVHFP
LTGLDMAPHVVKRSQSMRNLNMGAWPPSWKQSSGQHHQPADMNLPHDYLYDLYAVCNHHG
GMHGGHYTAYCRNSVDSQWYSYDDSSVDLVPEEEVCTRGAYILFYQRRNVIPSWSASSSL
RGSTSSSMSDHWLIRLTSNSKRGSLVSRSSTTCPSSIPDSPESPVFLENGSKEERGGFES
RPFVRGLQGRSVSMRAPTKTKDTLSKVLPLRWSFGSKDRRKPHPAPPGAQDPAPVELVQY
LESGRRPRCTKDPIVMLMSEPRSAKESAESKTATNIRSSSVGSLSFVGKAGDDAESPQVP
EGQKRPSDKTATLRRSKGSQPRDEATTNISSSSSSNTLTRRKDAKKQSSSKALQDTEPKM
GSSAGVQPSYSTPSLHDGTLRRQMGDRADRERHVAYEGNSKPKKGEVHKSHEGLLSFLKG
NFLKKDKDPKKSKESESGKGGGEEGGRRTLSRLSLSNGAAGGGTGVEGGKSYGSGQLGSE
LSNGKLGRTTASDIKRSQSSSNIPTKAEQSMRRTASLHRNGMSTAPAPTHSLTTDKPSYG
TLQRTRYSTTSLGRKRTVPESSF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggatacccgcaaggaaagcaaggtaagaaaacaacccatgaaacccaaaacgacgaag
cgaaaagaaaagaaatacaaaaccgggaggtttatgagaaggaaatcgctgcgatctttt
gggaatttcatgggaaggatccttaaaactttgggcactttggcgcactttggcgacgcg
caaccgccggacgcagaggacgacgacggcggttttgggcaaagcgctacaggcgactgt
tcgcacatccccagggagggaaccgtgaagaagagctccacggtgtcctctcatggctcg
gtgaaagacagactttcgtggtgctacggcgacaagacccccggggtgctgggactaaag
aaccacggcaacacctgtttcatgaacgccgtggttcagtgcctcagcaacacggacctg
ctggctgagtatctcgggctggagcagtacaagtcggatatttgccacaggagggtgaac
ggggaagtgagaggccaggagccaaggatcgccgggggagaagtgactgtgcagctggct
tcgctggttcgagcgctctggacgctggactacacaccacagctctccgtggagttcaag
agcatagtggccaagtacggctctcagtttcggggaaactctcagcatgatgctctggag
ttcctcctctggcttttggatagagttaatgaagatgtcaatccaagccccagtagcagc
agcaagaccaaagccaacgtcaaggcatccagttcattggaggatccctccagtcccagt
tcagctagcacacagcagtccagaggtcgacacagttttgtccaggatcactttcaggct
cagtacaggtcttctctgacgtgccctcattgccttaagcagagcaacaccttcgacccg
tttctatgtatctccctgcctatccccctacgacaaaccaggccgatgtgtgtgaccctg
gtgttcagtacaaagggtcagaggtatcttcgggtggggctggctgtacctctcattggt
tccttgtcctgcctgagagccatggtagcagaggagggcaaaatctctccagaccaggtc
atcttatcagagttgtactccacgggtttccagcgttccttcgcagatggcgatgacttg
acagcaatcgctgatagcgacgtcatatacgccttccaggctccactcctctacagtcgt
ggaggctctgcaccacactcagggtatcaccacagcctcccctcctctccttacacgtct
gctgctgggcctgatggtcaaagattaccatcatctggcacgctctcctctgaatacctg
aaccaaggtggctccacaaaggttcttctccttatctgcaacacagcaggatctggccct
caggccatcaggtttggacctccatttctcatgcgtgaggacaggagcgtctcctgggac
cagctgcagcagagcattctcagcaagctctattatctgatgctgaatggatctcaggct
cagaatgctggggtgctgtttaaggtccgagtggtgggaggatcggcatcctacagttac
ttgtccccacaggacagcaggcctttgtaccaccctgcggttgacagagccctgaagttt
tgcggccccgggggacctccacatgtgaaggttgtcattgagtgggagcacaagattaaa
gaatgtctgtttggcagcatccaggaggaggtggtgaaggatgcggaaagtgtaaggaac
cagcagcagcagcacctacagcagcatagttgtaccttggatgagtgcttccagctgtat
accaaagaggaacagcttgccccagacgatgcttggaagtgcccccactgtaagcagctt
cagcagggcatggtaaagatgagcctgtggacactccctgacatactgatccttcatctc
aagcgcttccgacaggtgggcgagcggaggaacaagctatcaaccctggtgcatttccct
ctgactggtttggatatggccccccatgtggtgaagaggagtcagagtatgaggaacctg
aacatgggggcctggccaccatcgtggaaacagtcctcaggccaacaccaccaacctgct
gatatgaacctcccccacgactatctgtatgacctttacgctgtgtgtaaccatcatgga
ggaatgcacggtggacactatactgcctactgcaggaactcagtggacagccagtggtat
agctatgatgacagcagtgtagacctggtgccagaggaggaagtatgtaccagaggggcc
tacatccttttctaccagagacgcaatgtcattccttcatggtcggccagtagctccctc
agaggctccacaagttcatcaatgtcagatcactggctaatccggctgacaagcaacagt
aagagaggcagtcttgtgtctagatcctccaccacctgcccgtcttccatacctgactcg
ccagagtctccagtcttccttgagaatggttctaaagaggaaagagggggttttgagagc
aggccatttgtcaggggtcttcaaggacgcagtgtgagtatgagagcccccaccaagacc
aaggacaccctgagcaaagtgcttcccctgcgctggtcctttggttcaaaagaccgacga
aaacctcacccagcacctccaggggcccaagatcctgctcctgtggagctggtccagtat
ttggaatctggccggcgaccccggtgtacaaaggatccaatagtaatgctgatgagcgaa
ccacgcagtgcaaaggaatctgctgagagcaagactgcaaccaatattcgatcttccagt
gttgggagcttaagttttgtgggtaaagcaggagatgatgctgaatctccacaggtccca
gagggccagaagaggccatcagacaaaacagccaccttgagacgaagtaaggggagccag
ccaagggatgaggctaccaccaatatcagcagtagttctagcagcaacaccctaaccagg
agaaaagatgccaagaagcagagctcctccaaagctctccaggatactgagccaaaaatg
ggctccagtgctggagttcagcccagctacagtactcccagccttcatgatgggactctg
agaagacaaatgggagacagggctgatagggagcgtcatgttgcatatgaaggaaactct
aagcctaagaagggagaagtgcacaagagccatgagggactgctctctttcttgaaaggt
aacttcctaaagaaggataaggacccaaagaagtccaaagagagtgagtcagggaaagga
ggaggtgaggagggaggcagaaggactctctctaggctgtcgctgtccaacggagcagca
ggaggcggaactggggtggagggtggcaagtcttatggctcaggccagctgggcagtgag
ctgtcaaacgggaagttgggacgaaccaccgcgtctgacatcaaacgctcccagagctcc
tccaacatccccacaaaggcagagcagagcatgcgcaggacagcatctctacatcgtaac
gggatgtctacagcgcctgcaccaacacacagcctgacaacagacaaaccatcttacggt
accctgcagaggactcgttacagcacaacttcactgggacgcaaaagaacagtccccgag
tccagcttctga
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integrated database retrieval system
