Scomber scombrus (Atlantic mackerel): 133992503
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Entry
133992503 CDS
T10651
Symbol
abcb11a
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133992503 (abcb11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133992503 (abcb11a)
04147 Exosome [BR:
ssco04147
]
133992503 (abcb11a)
Transporters [BR:
ssco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
133992503 (abcb11a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133992503 (abcb11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
ABC_ATPase
AAA_29
AAA_15
DUF87
Rad17
Zeta_toxin
AAA_7
AAA_21
Motif
Other DBs
NCBI-GeneID:
133992503
NCBI-ProteinID:
XP_062287117
LinkDB
All DBs
Position
13:complement(15472022..15480231)
Genome browser
AA seq
1310 aa
AA seq
DB search
MKESIKLKTTAGADEAADEENGDEKKKENGSVGYFQLFRFATCKDKLMMLVGSLCALIHG
AASPLMLLVYGMMTNTFVAYELEVQELKDPNKTCINNTIYWENGSIYETAENSTVYCGVD
IESQMTMFAYYYVGIGLGVLFLSYFQIFLWVSVAARQTQRIRKTYFRKVMRMEIGWFDCN
SVGELNTRISDDINKINNAIADQVSIFIERISTFVFGFMVGFIGGWKLTLVVIAVSPLIG
IAAGLMAMAVARLTGQELKAYARAGAVADEVLSSIRTVVAFGGEEKEAERYDKNLVEAQK
WGVKKGAIIGVFQGYLWCIIFLCYALAFWYGSKLVIDTKELTPGALIQVFFGVLMAAMNL
GQASPCLEAFASGRAAAKTIFETIDREPEIDCFAEDGHKLDRVKGDIEFHNVTFHYPSRP
EVKILNDLSMQIKAGETTAFVGPSGSGKSTTVQLIQRFYDPKEGMVTLDGHEIRSLNIQW
LRSLIGIVEQEPVLFGTTIAENICYGRPGVTMEDIIQATKEANAYNFIMDLPQKFDTMVG
ESGGQMSGGQKQRIAIARALIRNPRILLLDMATSALDNESEAVVQEALDKVRMGRTTISI
AHRLSTIRNADVIIGFEHGQAVEKGTHSELLERQGVYFTLVTLQNQGTSNTANDAVSEAA
EEDFDVRVRSFSRGSCRSSKSRSSVRLRSQSKLSNDILPDAVSGGLKILSDTPQNTCEDD
ALEHLEPAPVARILKYNKPEWPYMLLGSLGAAVNGSVNPIYAILFSQILGTFAIRDVTEQ
REQINGTCVLFCIVAVISFFSQFLQGYAFAKSGELLTRRLRKVGFQAMLKQEIGWFDDPR
NSPGALTTRLATDASMVQGATGSQIGMIVNSLTSIGASFIIAFYFSWKLTLVIMCFLPLI
GLSGAFQAKMLTGFANEDKNAMEAAGQVSSEALSNIRTIAGLAKESSFVESYEEKLEIPY
KSGKKKAHIYGICFGFAQCVIFMAYAASFRYGGYLVSSEGLQYMLVFRVISAIVISGTAL
GRASSFTPDYAKAKTAAAQFFKLLDRTPKIKMSHTDGEKWENFKGEVKFLNCKFTYPTRP
DIQVLKGLVVSVKPGQTLAFVGSSGCGKSTSVQLLERFYDPDEGQVLIDGHASHTVNVPF
LRSQIGIVSQEPVLFDCSIAENIQYGVNTQSISMEDIVEAAKKAYLHDFLMTLPDKYETQ
VGAQGSQLSRGQKQRIAIARAIIRNPKILLLDEATSALDTESEKTVQSALDKARKGRTCI
VIAHRLSTIQTADIIAVMSQGVVIEQGTHDKLMAKKGAYYKLVTTGAPIS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatcgataaaacttaagacaacagcaggcgcagatgaagcagcagatgaagag
aatggagatgaaaagaaaaaagagaacgggagtgttggatactttcagctgtttcgattt
gccacctgtaaagacaaattgatgatgttggtggggagtttgtgtgccctcatacatggt
gcggcctcacctctcatgctcctagtatatggcatgatgaccaacacatttgtggcttat
gagcttgaggttcaagaattgaaagacccaaacaagacctgcatcaacaacaccatctat
tgggaaaatggctccatttatgaaacagctgaaaacagtacagtctactgtggggtggat
attgaatcacagatgaccatgtttgcatattattatgttggaattggattaggagttctg
tttcttagctattttcaaattttcctctgggtgtcagtcgctgcaagacagactcagaga
atccgaaaaacttatttccgaaaagtaatgcgaatggagattggatggtttgactgcaac
tctgttggtgaactgaacacaaggatatctgatgatatcaacaagatcaacaatgccatc
gctgaccaagtgtctatcttcattgagaggatctctacgtttgtgtttggcttcatggtt
ggtttcatcggtgggtggaagctgactttggtggtcattgcagtgagcccactgattggt
atagctgctggactgatggctatggctgttgccagactgacaggacaagagctgaaggcc
tatgcaagggcaggggcagtggctgatgaggtcctgtcgtctattagaacagtagtagcg
tttggtggggaggaaaaggaagctgaaaggtatgataaaaaccttgtggaagctcagaag
tggggtgtgaaaaagggagccatcataggggtgtttcaaggatacctgtggtgcatcatt
ttcctttgctatgcgctggccttctggtatggatcaaaattggtaattgacaccaaggaa
ctgactcctggtgctctaattcaggtgttttttggagtactcatggcagctatgaacctg
ggtcaggcctcaccctgcctggaggcctttgcttctggtcgtgcagctgcaaagaccatc
tttgaaacaattgacagggaaccagaaatcgattgttttgcagaggatggtcacaaatta
gacagagtaaaaggtgacattgagttccataatgtcactttccattacccatcccgacct
gaagtcaagattttaaatgatctgagcatgcagatcaaagcgggagaaaccactgctttt
gttggaccaagtggatctggaaagagcaccacagtccagcttatccagaggttttatgac
ccaaaggagggaatggtgactttggatggacatgaaatccgaagtttaaacatccagtgg
cttcgatctctcattggtattgtggagcaggagccagtgttgtttggtacaaccattgca
gagaacatctgctatggtcgacctggagtaaccatggaagacattatccaggcaacaaag
gaggctaatgcctataattttatcatggacctgccacagaaatttgatactatggtggga
gaaagtggaggtcagatgagcggaggacagaagcagcggattgctatcgctcgagctttg
atccgaaaccccaggatcctgctgctggatatggccacatcggccttagacaatgagagt
gaggctgttgtccaggaagcattggataaggtgcgtatgggcaggaccacaatttctata
gcccatcgtctttccacaattaggaatgcggatgtcatcattggatttgagcatgggcag
gctgtggagaagggaacacacagtgagctgctagagaggcaaggtgtctacttcaccctg
gtcacccttcaaaaccaaggcacatccaacacagctaatgatgctgtcagtgaagctgct
gaagaggactttgatgttagagtgaggagttttagccgtggaagctgcagatccagtaaa
agtaggagctctgttcgactgcgatctcagagcaaattgtccaatgacattctccctgat
gcagtatctggcggcctcaagatcctttcggacacaccacaaaatacatgtgaggatgat
gcacttgaacatctagagcctgcccctgtagcgcgtatcttgaagtacaacaaaccagag
tggccctacatgctcctgggttctctgggagctgctgtcaatggctctgtcaaccccatc
tatgctatcctgttcagccaaattctcgggacctttgccatacgtgatgtgacagagcag
agggagcagatcaacgggacatgcgttctgttttgcattgtggctgtgattagtttcttt
tcacagtttttacagggatatgcttttgctaagtctggtgagctgctgacacgccgtctg
aggaaagtgggcttccaggctatgttgaaacaggagattggctggtttgatgaccccaga
aatagccctggagctctgaccaccagactagccactgatgcatccatggtccagggtgca
acaggatctcagattggcatgattgttaactcgttgaccagcatcggagcctctttcatc
attgccttctacttcagttggaagttaactctggtaatcatgtgcttcttgcccctcatt
gggctgtctggggcattccaagccaaaatgctgacaggttttgcaaatgaagataaaaat
gccatggaagcagcaggtcaggtatccagcgaggctctttccaacatcaggaccatcgca
ggcttggccaaggagagctcatttgtggaatcttatgaagagaaacttgagattccatat
aaatctggcaagaagaaagcccacatctatgggatctgttttggctttgcccagtgtgtg
atcttcatggcatatgccgcttcatttagatacggaggctacctggttagctctgagggg
ttacaatacatgctggttttcagagtgatttcagctatagtgattagtgggacagcactg
ggcagagcttcctcctttaccccagattatgccaaagccaagactgctgctgcgcaattt
ttcaaacttttggacagaacaccaaaaattaagatgagccacacagacggagagaaatgg
gagaatttcaaaggtgaagtaaagttcctcaactgcaagttcacctatccaacacgaccg
gatatccaggtgttgaaaggcctggttgtgtctgtgaagcctggtcagactttggcgttt
gttgggagcagcggttgtgggaaaagcaccagtgttcaactactggaaaggttctatgac
cctgatgaagggcaagtgttgattgatggccacgcatctcatacagtcaatgtgcccttc
ctgagatctcagattggcatagtgtctcaggagccagtgctgtttgactgcagcatagct
gagaatatacagtatggagttaacacacaaagcatcagcatggaagatattgttgaggcc
gccaagaaagcctaccttcatgactttctgatgacgctgccagataaatatgagactcag
gttggtgctcagggctcccagctgtcaagaggtcaaaaacaacgcattgccattgccagg
gccatcatcaggaatcctaagatcctgctactagatgaagctacttctgccctggacaca
gagagtgaaaagaccgtccagtccgctctggacaaggcaagaaaaggacgaacctgcatt
gtcatcgctcaccggctctctactatccagactgctgacatcatagcagtgatgtctcag
ggagttgtcatagaacaaggcacacatgataaactcatggccaagaagggcgcctattat
aaactggtcacaacaggcgctcctatcagctag
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integrated database retrieval system
