Scomber scombrus (Atlantic mackerel): 133992534
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Entry
133992534 CDS
T10651
Name
(RefSeq) target of Nesh-SH3 isoform X1
KO
K24477
target of Nesh-SH3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133992534
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133992534
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Gene cluster
GFIT
Motif
Pfam:
TARSH_C
fn3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
133992534
NCBI-ProteinID:
XP_062287164
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All DBs
Position
13:9816015..9842897
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AA seq
729 aa
AA seq
DB search
MMFRMQQHSHSFMVLLIIAFIAGIVLSSPSAPRRSRVRRQNMKVRISASGDTIVMKFLRP
NTDTKLEGYILGYGSSMFSKQFIQLPENGQPYETEFDAEPKYLIAVQPIPTNEVKKQCTG
KVELEKPLHLVIGSVTPTSVLLSWGTLLKTPYEGNVMNDCLEDGHYTVRYRERNRKWNYQ
TCPTSETVIDNLKPNTVYEFGVQPSTKDGTGVWSKPVIHNISTGGAEEKAIRKFVKRPVN
PVKPLTPGPQSFPFPPRHVLHNSTQGRVPVSRNIAPKTTFGTGVIRSSNAEVPRFPISSS
DPPAGRNTTLSRNRVHSPRNGVRPFSPPKTFPSSHSSSTPGADGTHHRGNAVPKPEWSKD
KPVLRPSIPVNKKTNLVGKPSEHDKPMDRKQGDKESILKPFPLVTAKPKQERRQPTTTSA
PALNSSRFDLNDNSSVFSSLPASELDIMGKKRFVAPHVVYKTDKKPNEPCSITSSLAYFP
DDEEGSDLNVTGPPRVPPSNLTVMTVEGCPSFVILDWQKSDNETREYEVISKIVGPHGEE
VSILTTNQTHTAVENLKPESSYEFQVTPKNELGSGPSSDPVSFSTESADPRVSEHVSGKD
AIWTQFPFKTDAYSECNGKQYVKRTWYRKFVGIQLCNSLRYKIYLSDSLNGKFYNIGDQA
GHGEDHCQFVDSFLDGRTGTQMLADQLPGRQGFYRAMRQEPVAFGEIGGKSHATYVGWYE
CGTPIPGKW
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttaggatgcagcagcactcacacagctttatggtccttctcatcatagccttc
atcgctgggatagttctttctagtccctccgctcctcgcagaagcagagtgagacgtcag
aacatgaaagtccgcatcagtgcatcaggagacaccatcgtgatgaagtttttgcgtccc
aacactgacacgaagcttgagggctacatcctgggctatggcagcagcatgttctccaaa
cagttcattcagctgcctgagaatggacagccttacgagactgagtttgatgccgaacca
aaataccttattgctgtccagcccatcccaaccaatgaggtgaagaagcaatgcacaggt
aaagtggaactggagaagccgcttcacttagtcattgggtcagtgacgcccacttcagtt
ctcctgtcctgggggacgctgctgaaaaccccctatgaaggcaatgtcatgaacgactgt
cttgaagatggacactacacagtgcgttatcgggagaggaacaggaaatggaactaccag
acctgccccacaagtgaaacagtcattgacaatctgaagcccaatacagtctatgagttt
ggtgtccagcccagcactaaggatggcacaggagtgtggagcaagccagtcattcacaac
atcagcacggggggagcagaagagaaggccatccggaaattcgtcaaacgtcctgtcaac
cctgtgaaacccttaacaccaggtccacagtccttcccctttcctccacgccatgttctc
cataacagcacccagggcagagtgcccgtctcccggaacatagccccaaagacaaccttt
ggtactggtgtcatcagatcctccaatgctgaagtccctcgttttcccattagctcatca
gatcctccagcaggaagaaacacaacgttgtctcgcaaccgagttcattcccctcgtaat
ggtgtcagaccattctctccacccaagacattcccctcttctcacagctccagcacacct
ggggctgatgggacgcatcataggggcaatgctgttcctaaacctgagtggtccaaagac
aaacctgttctgcgtccctctattcctgtcaacaagaaaaccaacctggtgggaaaacct
agtgagcatgataaacccatggaccggaaacaaggagacaaggagtccatcttgaagcca
ttcccactggtcacagccaaacccaagcaagagcgcagacagcccacaaccacctctgca
ccggccctaaacagcagccgttttgacctaaatgacaactcgtctgtattcagttccttg
cctgcatcggagttggacatcatgggaaagaagcgctttgtagctccccatgtagtctat
aagacagataaaaagccaaatgagccatgctctatcacctcctcccttgcatacttccct
gatgatgaggagggcagtgatctgaatgtgactggtccaccccgcgtaccaccatccaac
ctcactgtgatgaccgtggaaggttgcccgtctttcgtcattcttgactggcagaagtct
gacaatgaaaccagagagtatgaagttatatccaaaattgtaggacctcatggagaggag
gtgtccatactgacgaccaaccagacacacacagcggtagagaatctcaaaccagagagc
agttatgaatttcaagtaacaccaaagaatgagctgggaagcggaccctccagtgatcct
gtgtctttcagcacagaatcagcggatcctcgagtcagcgaacatgtttcaggaaaagat
gccatctggactcagttcccatttaaaaccgatgcctactctgaatgcaacgggaagcag
tatgtcaagagaacttggtaccgaaagtttgtgggtatccagctctgcaactccctgaga
tacaagatctacctgagtgactctctcaatgggaagttctacaacattggcgatcaggca
ggacatggtgaagaccactgtcagtttgtggactccttcctggatggacggactggcacc
cagatgttagctgaccagctaccaggcagacaagggttctacagagcgatgagacaggaa
cctgttgcctttggtgagattggagggaagtcacatgctacttatgtaggctggtatgag
tgcggcacacccatacctgggaagtggtaa
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