Scomber scombrus (Atlantic mackerel): 133992538
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Entry
133992538 CDS
T10651
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133992538 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133992538 (usp9)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133992538 (usp9)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133992538 (usp9)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133992538 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
133992538
NCBI-ProteinID:
XP_062287171
LinkDB
All DBs
Position
13:complement(8275639..8316967)
Genome browser
AA seq
2624 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDG
PPQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEAC
QRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAM
ATNPHCKFHIYNGTRPSETVPAGAQLADDELSARPPDPRSPKGWLVDLINKFGTLNGFQM
LHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKK
EAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALN
EVNKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQT
NLVGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVR
PGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSK
LMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMM
DDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRL
KASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRG
KHITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDP
ADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVE
SCLPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLD
HAKLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGL
PLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIP
VSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVI
RAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALM
PTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFT
VLGSTAKERAKHAGDYFTLLRHLLHYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGE
TGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMK
SGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEY
LPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEK
QENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPR
GFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQ
GCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLL
IKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQ
VIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDV
TECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSEL
VKYITELTISSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYL
NPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNV
RYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPST
QGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPAT
FMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSTRMQSSINGNPPLPNPYGDTNL
TAPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSP
PVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPE
DTSLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTQTQTQTQT
QSPTPAPGPTPGPGPRAQENWESTEEVAPAPAPTSTPAPAPPKE
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgacagtcagggccagggccag
ggccaggcacctgatgctcagagccaacccccactgccacagaaccagacatcatctcca
aactcatctaatgagaactctccagtgagcccaccagatgaacagggccagggggacggg
ccccctcagctggaagaggaagagcccgctttcccccacactgacctagccaagctagat
gacatgatcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtc
ctcttggaagctgctatagatctgagtaaaaaaggactggatgtgaagtgtgaggcatgt
cagaggtttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggca
gtcagtggctggaagtttgagattcataggtgtatcatcaataacacacaccggttggtg
gagctgtgtgtggccaagctctctcaggactggttccccctactggagctgctggccatg
gccaccaacccccactgcaagttccacatctacaatggcacacggccctctgagaccgtc
cccgctggagcacagctggctgacgatgagctctccgcccgaccaccagacccacgctca
cctaagggctggctggtggacttaataaacaaatttggcacgttaaacgggtttcaaatg
ttgcacgatcgcttcatgagtggccaagcactgaacgtccagatcatcgctgcacttatc
aagccttttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttcctt
ccaatcatcgaaatggttccccagtttctagagaatctcacagatgaggagcttaagaaa
gaggccaagaatgaagccaaaaacgacgcactgtccatgataatcaaatctctgaagaat
ctggcttctcgtgtaccaggacaggaggagaccgtgaagaatttagagatttttaggtta
aaaatgattcttaggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaat
gaagttaacaaagtgatctccagtgtgtcctactacacccatcggcataaccctgaagag
gaggaatggctgactgcagagcgcatggcggagtggatccaacagaaccacatcctgtcc
attgtcctgagggatagtttgcaccagccgcagtacgtcgagaaactggagaagatcctt
cgcttcgtcatcaaagagaaagctcttacaatgcaagatctggacaacatctgggctgca
caggctggtaagcacgaggctattgtgaagaatgtccatgaccttttggccaaactggcg
tgggatttctcacctgagcagcttgatcacctttttgactgtttcaaggcaagctggacc
aatgccagcaagaagcagcgtgaaaaattgctggaacttatccggcgcctggctgaggat
gataaggatggggtgatggcccataaggtcctcaacttgctgtggaacctcgcacacagc
gatgatgtgcctgtagacatcatggaccaggctcttagtgctcacatcaaaatattggat
tacagttgctcacaggacagagacacacagaagatccagtggatagatcgcttcatagag
gaactacgaaccaatgacaaatgggtgatccctgctctgaagcaaatcagagaaatctgt
agcctctttggagaagctcctcaaaaccttagaaagaaaatgccaattaacatacaaacg
aacttagtgggtcaaacccagagaagtcctcatgtgttttaccgccacgacctgatcaac
cagttgcaacataaccatgctctggtcaccttggtggctgagaacctctctgcctacatg
gagacaatgaggcagttctccaaagaagaacaggctgagtttgaccctcagacggtaagg
ccaggaagccgctacagccatgtccaggaagtacaggaacgactcaacttcctgaggttc
ctcctaaaagatggccagctgtggctgtgtgcccctcaggccaagcagatctggaagtgt
ctggcggagaatgcagtgtttctctgtgaccgcgaggcctgcttcaaatggtactccaaa
ctgatgggtgatgagcctgacctggacccagatatcaacaaagacttctttgagaacaat
gtcctgcagttggacccatctctgctgacggagaatggcatgaagtgctttgagaggttc
ttcaaggctgtcaactgcagggagggcaaattggtagcaaagcgcagagcctacatgatg
gatgacctggaactaataggcctggattacctctggagggtggtaattcaaggaagtgat
gacatcgccagtcgagctatagacctgctgaaagagatctacaccaatcttggaccaaaa
ctgcaagtcaatcaggtggaaattcatgaagatttcatccagtcatgttttgaccgtctg
aaggcatcgtatgataccctgtgcgtgttggatggagacaaagacagcatcaactgcgcc
cgtcaggaggctatccgcatggtgcgagttctcactgtgctcaaggaatacatcaatgag
tgtgacagtgactaccatgaggagaggactatactgccgatgtcaagagctttccggggg
aaacatatcacattgatcgtacgtttccccaaccagggtcgtcaggtggatgaccttgat
atctggtcacacaccaatgacacaattggctcagttcggcgtggcatcctgaaccgaatc
aaagcaaatgctgcacataccaagatagagctctttattggtggggaggttgttgaccca
gctgatgacaggaaactgattggacagctcaatctgaaggataaaacgctgatcacagcc
aagctgacccaggtgagtgccaacatgccctcaagcccagacagctcctctgactcatcc
accggctctcctggtaaccatggcaaccactacagcgatgggccaaaccctgaagtggag
agctgtcttcctggtgtgataatgtcgctgcatctgcgctacatctccttcctgtggcag
gtggcagacctgggctgcaatctcaacatgcccctgctcagagatggagcccgagttctc
atgaaactcatgcctccagataacactacagtggagaacctgcgagctgtgtgtctggat
catgccaagctcggtgagaacagcctcagtccttcgctggactcgcgcttctttggcccc
tcgccctcacaagtgctctaccttattgaggttgtgtatgcattgctgatgccagccagt
gccactctgggtgaggacgctagcgacttccagtacaacttcctgaagagcggagggctg
cccttggtgttgagcatgctcactaggaacaacttcctgccatcagcagacatggagaca
cgtcgtggagcttacctcaacgcgctgaagattgccaaactcctccttactgctgtaggc
tttgggcatgttaaggctgtggctgaggcctgccagcccaacgctgagggaaatatacct
gtttcaccgattaatcaggccactcatgaccaggccctggtcctccagagtgccctgcaa
aacatccccaaccctgcctcagaatgcatgctacgcaacgtagccatccgcctggctcag
cagatttctgatgagaatttcttccaggcatctaagtacatccctgacatttgtgtgatc
cgagcggtacagaaaatagtgtgggcttcaggctgtggcacagtgcagctcgtcttcagt
tctaatgaagaaatcagcaaaatatatgaaaagacaaatgcagcaaaagagccagatggg
gaagatgagcaggtgtgttgtgaggcccttgaagtgatgacattgtgtttcgccctcatg
cccacggctctggacacacttagtaaagagaaggcttggcagaccttcatcatagacttg
ctgctacactgccacagcaaatctgtgcgtcagatggcccaggaacaatttttcctgatg
gcaaccaggtgctgtatgggccatcgtcccctcctcttctttatcacactcctcttcact
gtgttggggagtacagccaaggagcgagccaaacacgccggggactatttcactttgctc
agacatcttctgcactatgcctacaacagcaacatcaacctgccaaacgctgaggtgctg
ctcaacaacgagattgactggctgaaacggataagggatgaagtaaagaggacaggggag
actggtgtggaggagaccatcctggagggccatcttggggtcactaaggagcttctcgct
ttccagacgccagagaagaagtattacatcggctgtgagaagggaggagctaacctcatt
aaggagctgattgatgacttcatctttccggcatctaatgtttacctgcagtacatgaag
agtggggagttccccacagagcaggccatcccagtgtgcagcacccctgcttccatcaac
gctggctttgagctcctggtggctctggctgtcggctgtgtccgcaacctcaaacaaata
gtcgacactctaactgacatgtactacttaggttgtgaaacactgacagagtgggagtac
ttgcctccagtgggcccaaggcccaacaaaggctttgtaggtctgaagaatgctggggcc
acctgttatatgaactcagtcattcagcagctgtacatgatccctccgatccgcaatggc
atcctggccatcgagggcacaggcactgacgtggatgatgacatgtcaggggatgagaag
caggagaatgagagtaacgtggatccgcgtgatgaggtgttcagctatcaccaccagttt
gatgataagccttccagtaagtcagaggacaggaaagagtacaacatcggggtactgcgt
cacctacaggtcatctttggccacctggctgcatccagactgcagtactatgtccctcgg
ggattctggaaacagttcaggttatggggtgagccagtgaacttgagggagcagcatgat
gctttggagtttttcaactctttggtggacagtctggatgaagctctgaaagccctgggc
caccccgccatgctcagcaaggtgctgggaggctcctttgctgaccagaagatctgtcag
ggatgcccccatagatatgaatgtgaggaatcgttcacaacactcaatgtagacatcaga
aaccaccagaatctgttggactccatggagcaatatgttaaaggggatctgctggaggga
gccaacgcctatcactgtgagaagtgtaataagaaggtggacacagtgaagcgcctgctg
attaagaagctaccgcctgtcctggccatccagctgaagcgatttgactacgactgggag
agggagtgtgccatcaagttcaatgactactttgagttccctagggagctggacatggag
ccgtacacggtagcaggagtggccaagctagaaggggacgacgtcaacccggagaaccag
gtgatccaacagaacgagccctcggaacccacgcctccaggcagctccaagtaccgtctg
gtgggggtgctggtccactccggccaagccagcggcggacactactactcctacataatc
caaaggaacgggggcgatggcgagaaaaaccgctggtataagtttgatgatggcgacgtg
actgagtgcaagatggacgatgaggaggagatgaagaaccagtgcttcggtggggaatac
atgggcgaagtgttcgatcatatgatgaaacgcatgtcgtaccggaggcagaagcgctgg
tggaacgcctacatcctgttctatgagcgtatggactcactagacaaggacagcgagctt
gtcaaatacatcacagagttgaccatctcctccaccaagccgcatcaggtcaagatgcct
ggtgtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccgaatgcaa
tacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctattta
aaccctcctccaggacaagaccatcttctgccagaggcagaggagattgctatgataagt
gctcagctggctgctaggttcctcttcagcacaggttttcacaccaagaaagtagtacgg
ggtcctgccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgta
cgctattggtttgcacacaacgttctgtttgcttatcctaaccggttctctgagtacctg
cttgagtgcccgagcgctgaggtgcggggcgcgtttgccaagctcattgtcttcatcgct
cacttttccctgcaagacggcccatgcccctcccctaccgcctcacccggaccctctact
cagggctgtgataatctcagtctaagtgaccacctgttgagagctgtactcaacctgctc
agaagagaggtttctgaacacggccgtcacctgcagcagtacttcaacctctttgtcatg
tatgccaatctgggcctggcagaaaagactcagctgttgaagctgaatgtccctgccaca
ttcatgttagtcgctctggatgagggtcccggccctcccataaagtaccagtacgccgag
ctgggaaagctctacactgtcgtctcccagctggtgcgctgctgtgacgtctcaacacgc
atgcagtcctctatcaatggtaaccctcctctccctaacccctatggcgacaccaacctg
acagccccagtgatgcctgtgcagcagctggtggcagagattctgtttgtgaggaccagc
tacgtgaagaagatcatcgaggactgcagcaactctgaagagaccgtaaagctgcttcgc
ttcagctgttgggagaaccctcagttctcctccaccgtgctcagcgagctgctctggcag
gtggcgtactcctacacatacgagctgaggccttacctggacttgctgctacagatcctg
ctcattgaagactcctggcagacacacaggatccacaatgtgctgaagggcattcctgat
gacagagacgggctttttgacaccattcagcgctccaagaaccactatcagaaacgggcc
taccagtgtatcaagtgcatggtggccctctttagcaactgctccgtggcctaccagatc
ctacagagtaatggcgatctgaaacgaaagtggacgtgggccgtggagtggctcggggac
gagctggagaggaggccatatacagggaaccctcagtacacctacaacaactggtctcct
ccggttcagagcaacgaaacctccaacggctatttccttgagcgttcacacagtgcacgt
atgacactcgccaaggcctgtgaactttgtcctgaggagctcaagtgtactcagggaagc
ccagggaaggagccagatgaacaggaagcacctgatgatcaagactcctccccacctgag
gacacctctctgtacccacattctcctggaaccacccaatttcagcagaacaaccacccc
catgggcagccgtacaccgggcctgctgctcagcacatgaacaacccccagcgtcctggt
cctgcctctgccccgactccaggccctacccagacccagacccagacccagacccagacc
cagagccccaccccagcccctggtcctactcccggcccgggcccgcgagcacaagagaac
tgggagagcaccgaggaggttgcccccgcccccgcccccacctctaccccagcgcctgcc
ccgcctaaggagtaa
DBGET
integrated database retrieval system
