Scomber scombrus (Atlantic mackerel): 133992543
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Entry
133992543 CDS
T10651
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04210
Apoptosis
ssco04530
Tight junction
ssco04540
Gap junction
ssco04814
Motor proteins
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133992543
09143 Cell growth and death
04210 Apoptosis
133992543
09144 Cellular community - eukaryotes
04530 Tight junction
133992543
04540 Gap junction
133992543
09142 Cell motility
04814 Motor proteins
133992543
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133992543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133992543
03036 Chromosome and associated proteins [BR:
ssco03036
]
133992543
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133992543
04147 Exosome [BR:
ssco04147
]
133992543
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133992543
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133992543
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133992543
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133992543
Exosomal proteins of other body fluids (saliva and urine)
133992543
Exosomal proteins of colorectal cancer cells
133992543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
133992543
NCBI-ProteinID:
XP_062287181
LinkDB
All DBs
Position
13:complement(17269632..17271405)
Genome browser
AA seq
414 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIESPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVADITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAI
KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFAEAREDMAALEKDYEEVGTDNMGEEDEGEEY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgataaaactattggaggaggagatgactccttcaacaccttcttcagcgaa
acaggagcagggaagcatgttccaagagccatctttcttgacctggaacctactgtcatc
gatgaggtgcgtacaggaacctaccggcagctcttccaccctgagcagctgattacagga
aaggaggatgctgccaacaactacgcccgaggacactacaccattggcaaggagatcatt
gatctggttctagacaggactcgtaaactggctgatcagtgcactggcctgcaggggttc
ctcatcttccactcctttggtggtggcactggctctggtttcacctccctgcttatggag
agactctccgttgattatgggaagaaatccaagctcgaatttgccatctacccagcccct
caggtctccacagcagtggtggagccctacaactccatcctgaccacccacaccaccctg
gagcactctgactgtgccttcatggtggacaatgaagccatctatgacatctgccgtaga
aaccttgatatcgaaagtccaacttacaccaacctgaacaggctcatcggccagattgtg
tcttcaatcacagcttcacttcgctttgatggagccctgaatgttgacctgacagagttc
cagaccaacttggtgccctaccctcgtatccacttccctctggccacctatgcacctgtc
atctctgctgagaaagcctaccatgagcaattgtctgttgctgacatcaccaacacctgc
tttgagccagctaaccagatggtgaagtgtgatcctcgtcatggcaaatacatggcctgc
tgtctgctgtatcgtggtgatgtagtgcccaaagatgtcaactctgctattgcagccatc
aagaccaaacgcagcatccagtttgtggactggtgtcccacaggcttcaaggtgggtatc
aactaccagcctccaacggtggttcctggaggagatctggccaaggttcagagggctgtg
tgtatgctgagcaacaccacagccatcgctgaggcctgggctcgtctcgaccacaagttt
gacctcatgtatgccaagagggcctttgtccactggtatgtcggggagggaatggaggag
ggagagtttgcagaagctagggaagatatggctgccctggagaaggattatgaagaggtg
ggtactgacaacatgggtgaggaagatgaaggagaggaatattaa
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