Scomber scombrus (Atlantic mackerel): 133992552
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Entry
133992552 CDS
T10651
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
133992552 (aff3)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133992552 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
133992552
NCBI-ProteinID:
XP_062287193
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All DBs
Position
13:10581124..10597634
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AA seq
1228 aa
AA seq
DB search
MPTVLGGKGKLSIVSFLLRCAYSQVTRSQHNSCAKDILEDMTQSWPSQQALGGDQTQRIL
YNHKDGKHSTTQQRQNRGDVPLRMTRHPHVAPHKSMLADDLKLSSDEDDTQRATDESATW
DGHSLSAQRVHTHGRRVRHSSSDSSGSDSTAESVSSSFHSRSSSPEAHPDPASPANTQPP
CDNKETNHPSAAQWQLDKWLKKSRKKTAIGEHYPAQSIPGRLPSPHTQRAPSPARCWDSN
QEYSPSQSPIPSPQFNYSHNSSPLPSPGYSFCPSPSPFPSTCPSPSPSPRHSSIPSPVPS
VCPSPCGSQRASPSPSPIPLGRDPPRSPSPSLPPSRVRHYPEVQSHHQLNRTQPSATTTP
HRTKSRSWFATLPNTDSKSKPTNSTHPQSPHPHRPKSRPAQDHDQSQNKSKAPAVLDSNN
SQSHKCRPKPNFHPSSKQLVEPPKAKQTTHFGQNSFLSNSKHKNRPTVQPRSQHSPTRAK
NLAPSSRETNPGHSSHSQSTSKAVSNSNTGSNSRSSPNLKPKATAPAPVHGIQSKTSQKK
PQSKEREVGHRETNLTQAEGRKHERKEDRHKQIEQGKQERKEDRRLAEEQLLRRPWIQSS
EDEEEEEAEGVKERQRRREETERAENRRRREQQHRHEWQTVQAKNRLPTSVERHHLQDDS
QHPGRTNKGGRSEKERVSHPDPSPAPSRTLTSHPPSSSSSASSSSNSDSESEYQAQITKV
PADSTSHKRLTQRGQRGPGRTDTNRPKVVHPSGPTSSNLSEGQQSEGRQKLYTLVPFGRG
DKATASSQRGLRNLVVQIDLCLLKRVPDSTTNSPVKKPSSLSTKDKQTEAMKHLFMPDTE
TKDGKRKRKLENGVSHKESKRSIPYTNDLSGRTESSFHAAEHNFSTVTTHNGYLEEYLDS
KRPLSPLSPLSDSPESNKLSNKTKNAEVHHIHNHKNKDKNRDSAAKPKMEVECVKVSGQP
QPPSESWGPAGHRGTMPNHETTHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFM
ECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLY
WQMFRLKKDHALKYSKVLLDYFKSSPKVPITPPGWNDTEKDIGGPPSSLSPNAKHLRRSS
HGGTTSPSHISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKESKEFFNYLNTLSGP
LTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaagggaaactttccattgtctcttttttgctccgatgc
gcatattctcaggtaacaagaagccaacacaacagctgtgccaaagatattctggaggac
atgactcagtcctggccgtcccagcaagccttagggggtgaccagacccagcgaattctc
tacaaccataaggatggaaaacattcgactacacaacaaaggcaaaatcggggggatgtt
ccactacgaatgacccgtcaccctcacgtggcgcctcacaaatcgatgcttgctgatgac
ctgaagctgagcagtgatgaggatgacacccaaagggcgactgatgagtcagcaacctgg
gatggacacagcctgtcagcacagcgagtgcacacacatggcaggcgggtgagacattcc
agctcagactcctcaggctcagactccactgctgaatcggtgagcagtagttttcattcc
aggagctccagcccagaagctcacccagatcctgcatcgcctgccaacactcagcccccg
tgtgacaacaaggagaccaatcacccctctgctgcccagtggcagttggataagtggctg
aagaagtcccggaaaaaaactgccatcggtgagcattatccagcccagagcattccagga
cgcctgccctctccacacacccagcgagccccatctccagctaggtgctgggacagcaat
caagaatacagccctagccaaagccctattcccagcccacagttcaattacagccacaac
agcagccccttaccgagccccgggtacagcttctgccccagcccaagcccattccccagc
acctgtccaagtcctagccctagcccaaggcacagttcgatccccagtccagtaccaagt
gtttgccccagtccatgtgggagccagagagctagccctagccctagccctataccccta
ggtagagatcctcccagaagcccaagtcccagcttacctccttccagggtccgtcactac
cccgaggttcagagtcatcatcagctgaaccgaacgcaacctagcgcaacaaccactccc
cacaggacgaaaagtaggtcatggtttgctacgttgcctaacactgattccaagagcaag
cccacgaatagtacacatcctcagtcacctcatccgcacaggcctaagtctagacctgca
caggaccacgaccaaagtcaaaataaatccaaggcccctgcagttttggactctaacaat
agtcaaagccacaaatgtagacctaagcctaattttcatccaagctctaaacaacttgtt
gagcctcccaaagccaaacagacaacgcattttgggcaaaatagttttttgagcaactct
aaacacaagaaccggcctacagttcaacctaggtcacaacatagtcccacaagagcaaag
aatttagctcccagtagtcgtgaaacgaatcctggtcacagttctcattcccaatccacc
tctaaagctgtcagtaattctaatactgggtcgaactctagatccagtcctaacctaaaa
cctaaggctacagccccagctcctgtgcatggtattcaaagcaaaacatcacagaagaaa
ccccagtccaaggaacgggaggtaggccatagagaaactaatctaacccaagcagagggg
agaaaacacgagagaaaagaggacagacataagcaaatcgaacaagggaaacaggagaga
aaggaagacaggaggctggcggaggagcagctactgagacgtccgtggatccagagttca
gaagacgaggaggaggaagaggcggagggagtaaaggagaggcagaggaggagagaggag
acagaaagagcggaaaacagaagaagaagggagcagcagcatagacacgaatggcaaaca
gtccaggccaaaaacagactgcctaccagcgtcgagcgacaccaccttcaagacgactca
caacacccaggcaggacaaacaagggagggagaagtgaaaaggagagagtgtcacaccca
gacccttcacccgctccttcacgtaccctgacttctcatccaccatcctcctcatcctct
gcctcttcctcttcaaattcagattcagaatctgaatatcaagcgcaaatcaccaaagtt
cctgcagattctacttcccacaagagactcacccagagaggccaacgaggcccaggcaga
actgacaccaacagaccgaaggtggtgcacccaagtggacccacctcaagtaacctaagt
gagggacagcagagtgaggggaggcagaaactttacaccctggtcccatttgggcgaggt
gacaaggccacagcgtcctctcagcgcgggctgagaaatctagtggtacagattgacctc
tgtcttctcaaaagggtcccagacagcactactaattcccctgttaaaaaaccttcctct
ttgtccaccaaggacaagcaaacagaggctatgaaacacctctttatgccggacactgag
acgaaagacggcaaaaggaaacgcaagctggagaatggtgtgtcacacaaagaaagcaag
aggagtattccttatacgaatgacctctcaggccgcacagagtcttcatttcatgcagct
gagcacaacttttcgaccgtgaccacacacaatgggtacttggaggagtacttggatagt
aagaggccattgtcacccctgtctccactgtccgacagccccgagtccaacaagctgtcc
aacaaaacaaaaaatgctgaggtgcatcacatccacaatcataagaacaaagacaagaat
agagattctgctgcaaagcctaagatggaggtggaatgtgtaaaagtgtcaggacagccc
caaccaccttctgagtcctggggccctgcaggacacagggggaccatgccaaaccatgaa
actacccaccatgctgagtactacttacatgaagccaaaaggatgaagcatcgtgcagat
gcaatggtggacaagcttggaaaggctgtgaattacgttgatgctgctctctctttcatg
gaatgtgggaaggcaatggaggaagggccacttgaggcaaagtctccctatacgatgtac
tcggagacagtggagcttataaggtacgcaatgaggctaaagagccactccggccctggg
gccagacaggaggacaaacagctggccgttctgtgtttccgatgccttgccctcctttac
tggcagatgtttcgtttaaagaaggaccatgcattaaaatactcgaaagtactgctggat
tattttaagagttctcccaaagtgcctataacaccacccggttggaatgacactgaaaag
gatatcggaggacccccttcttcgctctcacccaatgccaaacacctcagacgaagttca
catgggggcaccacctctccctctcatataagcattccccaacgtatccaccagatggca
gcaaatcacctgaacattaccaatagtgtgctgtacagctatgagtactgggaggtggca
gacaacctggcaaaggagagtaaagagttcttcaactacttgaatactttgtctgggcca
ctgacgcttcacagtagcattgctcatgcagtccagtacaccagacaggctctccagtgg
atccgcattagtgccaaacttaactaa
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integrated database retrieval system
