Scomber scombrus (Atlantic mackerel): 133992560
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Entry
133992560 CDS
T10651
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133992560
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
133992560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_6
C2-set_2
Ig_5
Ig_4
Izumo-Ig
Ig_C17orf99
C2-set_3
fn3
Motif
Other DBs
NCBI-GeneID:
133992560
NCBI-ProteinID:
XP_062287208
LinkDB
All DBs
Position
13:complement(24407060..24442554)
Genome browser
AA seq
1979 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVMVQSGTDAVLKCQIGGDPRPAVIWERNNEKIDPQERYRVFEDG
NVYNLIISAVTAEDSGQYICKAKNSIGETYAAATLKVEGEAQEMELREENKPRFLIKPLS
TRVGRGEDAVFSCKLWGNPRPEVAWEKDGRKLNEIFESTHFSVGYQDGGWFQLKIFKTRA
PDGGVYTCKARNECGEALAGAVLLVDAGPGHEDDGNRNGYTNGHWKGHQGKQRSGRQVSN
RLKDDPLTKSTKVKMFAVTEGKHAKFRCFVTGKPKPEIIWRKDGRLILSGRRYLLYEDRE
GYFTLKVLYCKQKDNGVYVCAASNTAGQTLSAVHLTVKEPPVRFKQPLIDLEVWERDLAV
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDIGVDDDGIYLCEMPDGGR
SIAEVAVKGTILRKLPRKVDVLEGENAAFCVEVEKEEMDIHWYKDGVELRETHKTILKSF
GRTHILVFVNTMPQDSGLVIFLVGRSKTSSQLRVKAARHCPPSCPVGVQINTERANAALL
SWVPAQDSRKNPPSGYVLERQEVGTGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRIC
SVNKYGKSNNVEFPRAVHLVPVARIQAPLQDALVPEGQDGLFSIELSASVIGTWFLNGTQ
LQEDERYSMRRTRTHQSLRIRGVRDTDNGAEITFIAYGIRDSAALYIQAPLVKFSPLSEM
DRNKFVEIGNPIVLYCELSDPAAPVHWYKNGVELQTVEGLHIQSEGTMRRIVIQSAEFSH
SGVYCCDAIDDVIRFNVEVEAPPVTFADIPEEDLFKSVVEKEELALSCEVSRADGVVQWY
KDGTEVQLSDNITIQAEGTQRNLTIHSAQLSDSGTYTCRAGDNILVIKVNIREPPVTIIY
PKEDVHLDRHVPEEIILSCELSRPNGVVSWYKDGQKLQESENIKLKVEGPYRRLKIISSG
VEDSGEYVCDTADDSIFFNLSITEPPVRIVSPSQSQMELCQQTSERMVLSCEISRPNAMV
RWYRDGLEVEENDNLILEVDGVYRRLIIPETTVKDSAEYVCDTADDSVTFFVNIAEPPVR
FIRPRKTASRLEKVVGNTLVLDCEVSRSNAEVTWKKDGEEVEDSRNVTILEDGAIRQLTI
HSLTVEDAGQYVCDAKDDVMDFHVKVQELPVKILGKTDAKTEKQFLVSDDIILVCELSRA
NASVSWYKDNQLIDDTERYCSEEQGVFRSLVVLNAGLEDSAEYTCDAVDDKMIFYITVKE
PPVKIIGNSGHPEHHMLVAGDDLILECELSRSNATVQWLWNGEILKPDTRVKIDSYDVVR
KLVLSGLQPSDSGKYICDATDDKLITIVEVQAPHVVEFIAELRSITVCEGEDAVFKCVVS
PEDTRLVWYLNGKQVALNERTVISSNGLCHMLCIHNCMVSDSGKVTADAEGLVSDAELQV
QEQQVLFTKKMTPVIAEEYSEATLEVEVSRDSEEVQWMRQGVLIHPGAKYTLKHKGRKHS
LTIHKLTMSDRGTYSCETLHDRTQAQLTVEPRKITIKRELTDIKTTERETASFEVELSHP
NVPGTWTRNNIQLKPTHHFRMTAKGQVHSLTVSNLSVEDTGTFTFCVENLKTSARLVVKE
PLVTVFRKLENQKFPEGAIVSIECELSRHNINVKWIKDGVELKPGKDLRIYAMGRKRFLQ
IMKCQVSDSGVYTCDAGDVTTSCTVEVYERELLIVQGLEDLHIQEDQNAVFVCEISVEDV
PGEWYKNGEKIQPTSTIKIRQEGKKHFLLMCNVRPEDCGEIKFVARHIESVTCLEVEEVP
VNIVKPLQDKTALEKSRVILDCTVSNPRCSIRWYKGSNVILPSERFEICSEGCYRKLIIQ
QVVLEDEGMYSVQVGEYSCSAKLTVEAQSLLMVRELKDVEVKAPNEACFECEVSVPVIKS
PVWSLNGEPLQQSPHVRLEKMGTVHRLTLRQTSPDMSGAVEFTSGKAKSTAQLRVLSDP
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttggtggtgcaccacgtttcttggcctacccaagacctgtgatggtacaa
agtgggactgatgcagtcttaaagtgtcaaattggtggtgatccaaggcctgcagttatt
tgggagcgaaacaatgaaaagattgacccacaagaacgatacagggttttcgaggatgga
aatgtttacaatctcattatttcagctgtgaccgcagaggatagtggtcagtacatatgc
aaagcaaaaaacagtataggggaaacatacgcagctgccacactgaaggtggaaggtgag
gcacaagagatggagttacgagaggaaaataagccacgattcctcatcaagcccctctcc
actcgtgtcggccgtggggaagatgccgtcttctcttgtaagctctggggaaacccacga
ccagaggttgcctgggaaaaggatggcagaaaactcaatgaaatatttgaaagcacacat
ttcagtgtgggctaccaggacggtggatggttccagcttaagatctttaagactcgtgcg
ccagacggtggtgtatatacatgcaaggctcggaatgagtgtggggaggcattggcagga
gctgtgttgcttgttgatgctggcccaggacacgaggacgatggaaatcgtaatggctac
acaaatggccactggaaaggtcaccagggaaaacagaggagtggtaggcaagtgtcaaat
cggctaaaagatgaccccctgaccaagtcaacaaaggtaaaaatgtttgcagtgacagag
ggcaaacatgccaaattccgctgctttgtgactggaaaacccaaaccagaaatcatttgg
aggaaagacggcaggctgatactatctggaagacgctatttgttatatgaggacagggaa
ggatacttcacactcaaagttctgtactgtaagcagaaggataacggagtttatgtttgt
gctgcatcaaatactgcagggcaaactctcagtgccgtacacctcactgtaaaggagcca
cctgtgcggttcaagcagcctcttattgatctagaggtttgggaacgagacttggctgtt
ctcgagtgtgaagttccagaggactcggttcccatcacgtggtatctggaggatagaaga
ctgcagccgggggccaaatatggaatggaggagtggggaacaaaacggcggctaaccatc
cgtgacattggagtcgacgacgatgggatatacctctgcgagatgcccgatggtgggaga
agtattgcagaggtagctgtgaaaggtacaattttgcgaaagcttccaagaaaggtggat
gtcttggaaggcgaaaatgctgccttttgtgttgaggtggaaaaagaagagatggatata
cattggtacaaagatggtgtagagctgcgtgaaactcataagaccatcctcaagtccttt
ggtcgaactcacatcctggttttcgtcaatacaatgccccaagactccggccttgtgata
ttccttgtaggcagatccaagacttcctctcagctaagagtgaaagccgccagacattgt
cctcccagttgtccagtgggtgtgcagatcaacacagagcgtgccaatgcagctcttctg
tcgtgggttcctgctcaggactcgcgaaagaaccctccatctggatatgtgcttgagcga
caggaagtgggcaccggctcacaggagtggctacagtgcttgaccactgactcagcaacc
tctgtggagatccttggtgacagcgtaccatgtgaagctgattatcgatttcgtatttgc
agcgtaaacaaatacggaaagagcaacaatgttgagttccctagggcagttcacttggtt
ccagtggccagaatacaagctcccttacaggatgcattggtgcctgagggacaagacggc
ctcttctctattgagctctctgcttctgttatcggcacatggttcttaaacggcactcag
cttcaggaggatgaacgttattccatgcggcggacccgaacacaccaatctcttcgtatt
agaggagtacgtgatacagacaatggagctgagattacctttattgcctatggcataagg
gattctgcagcactgtacatacaagctcctcttgtcaagttttcaccactgtccgaaatg
gatcgaaacaaatttgtagagattgggaaccccattgtgctctactgtgagctgtcagac
cctgcagcaccagtacactggtacaagaatggggtggagttacaaacagtcgagggtctt
catatccaatcagagggcaccatgagaagaattgtcatccaatcagcagaattctcacat
tcaggagtttattgctgcgatgccattgatgacgtcatcaggtttaatgtggaagtagag
gcaccaccagtcacatttgctgatatcccagaggaagaccttttcaagagcgttgtggaa
aaagaagagcttgctctgtcatgtgaagtatcaagggctgatggtgttgtccagtggtat
aaagatggaactgaagtgcaactgagcgacaatattacaattcaagcagagggcacccaa
agaaatctgacaatccattcagctcaactgtcagactcaggcacatatacatgccgtgca
ggagacaacattttagtgatcaaggttaacatacgagaacctccagtgacgataatctac
cccaaggaggatgtccacctcgaccgtcatgtccctgaggaaatcattctgagttgtgaa
ttgtctcgtccaaatggtgttgtgagctggtacaaagacggccaaaagctgcaggagagt
gagaacatcaagctcaaggttgaaggcccttatcgacgactgaagattatttccagtgga
gtggaagattctggagaatacgtctgtgatacagctgatgattcaatattctttaacctt
agtattacagagcctccggtgcggattgtatccccaagtcagtcacaaatggaactgtgt
cagcaaacgtccgagaggatggtactgagctgtgagatctcacggcctaatgcaatggta
cgctggtatcgagatggacttgaagtggaggaaaatgacaaccttattctagaggtggac
ggtgtctacagaagacttattatacctgaaactacggtcaaagattctgcagaatacgtc
tgtgatacagcagatgactcagtgacgttcttcgtcaacatagcagagcctcctgttcgc
tttatacgtccacggaagaccgcaagcagactagaaaaagtggttgggaatactctggta
ttagactgtgaagtttccagatcaaatgctgaggtcacttggaagaaggatggagaagag
gtggaggactccagaaatgtaaccatccttgaagatggtgccatacgtcaattgaccatt
cactcattgacagttgaagatgctgggcaatatgtctgtgatgcaaaggatgatgtgatg
gacttccatgtaaaagtacaagagttgcctgtgaaaattctcggaaaaactgacgcaaaa
acagagaagcagttcttagtatcagatgacataattcttgtgtgcgaactatcaagagcc
aatgcctcagtcagttggtacaaagataaccagctaattgacgacactgagcgatactgt
agtgaggagcaaggtgttttccggtcactggttgtcctaaatgctgggctcgaggattcg
gcagaatacacctgtgacgcagtggatgataaaatgatcttctatatcactgtcaaagag
cctccagtaaagatcattggaaattcaggccacccagagcatcatatgctggtagcaggg
gatgaccttattttggagtgtgagttgtctcggtcaaacgccactgttcagtggttatgg
aatggtgagatactgaaaccagacactcgagtaaaaattgacagctatgatgttgtgagg
aagcttgttctctctggacttcagccctcagactctggaaaatacatttgcgatgccacc
gatgataagctgataacgattgttgaggtccaggctccccatgttgttgagttcatagcg
gagcttcgtagcatcacagtctgtgaaggagaggatgcagtatttaagtgtgtggtttcc
ccagaggacactcgcttggtctggtacttaaatggcaaacaagttgctctgaatgagcgc
actgtcatttcaagcaatggactatgccacatgctctgcatccacaactgcatggtttca
gatagcggcaaagtgacagctgatgccgagggactggtatcagacgcagaactccaggtt
caagaacaacaggtgttgttcaccaagaaaatgacaccagttatagctgaagagtacagt
gaggcaactctagaggtggaggtgagtcgggattcggaagaggtacagtggatgaggcaa
ggggtgctgatccaccctggagccaagtataccctgaaacacaagggccgaaaacacagt
ctcaccatccacaaactcaccatgtctgaccgtggcacctacagctgcgaaaccctccat
gaccgcacgcaagcccagctcacggtggaacctcgaaaaatcacaatcaagagggagctg
actgacatcaaaaccacagagagagaaacagcctcttttgaggtggaactgtcccatccc
aacgtaccaggcacctggacgagaaacaacattcagctcaagccgacacatcacttccgc
atgactgccaaaggacaagtccacagcctcactgtctcgaatctgtcagtagaagacact
ggcacctttacgttctgtgtggagaatttgaaaacatctgcaaggcttgttgtcaaggag
cccctagtgacagttttcagaaaactggagaaccagaaattccctgaaggtgcaatagtg
tctattgagtgtgagctgtcaagacacaatatcaatgtgaaatggatcaaggatggggtt
gagttgaagccgggcaaggatttgcgcatttatgcgatgggacggaagcgtttccttcag
atcatgaaatgtcaagtcagtgattctggcgtgtacacctgtgatgctggagatgtgact
acgtcctgcactgtggaggtctatgagcgtgaactgctgatcgtgcagggcctcgaggat
ctgcatatccaggaagatcagaatgcagtgtttgtttgtgagatctcagtagaggacgta
cccggcgaatggtacaaaaatggagagaagatacaacccaccagtaccatcaagatccgc
caggaagggaaaaaacattttctcctgatgtgcaatgtgcgcccagaggactgtggagaa
atcaagtttgtcgccagacatatcgaatctgtcacttgcctggaggtggaagaggttcct
gtcaacattgtgaaacctctgcaggataaaaccgccctcgagaagagccgtgtgatctta
gactgcacagtgtccaaccccagatgtagtatccgctggtacaaaggcagtaatgtcatc
ctaccctcagagcgctttgagatctgcagtgagggctgttatcggaaactaatcatccag
caggtggtgctagaggatgagggcatgtacagcgtgcaggttggagagtattcatgctct
gctaaactgacagtggaggcccagtctttgttgatggtcagagagctgaaagacgtggag
gtcaaagcccccaacgaagcctgttttgaatgtgaggtgtcagtccctgtcatcaaatcc
cccgtgtggagcctgaatggggagcccttgcagcaaagccctcatgtacgtctggagaag
atgggaacagtccaccggctgaccctgagacaaacctccccagacatgagtggagcagtg
gagttcacttctggaaaagccaagagcacagctcagcttcgggtgcttagtgatccgtga
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