Scomber scombrus (Atlantic mackerel): 133992716
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Entry
133992716 CDS
T10651
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00100
Steroid biosynthesis
ssco01100
Metabolic pathways
Module
ssco_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
133992716 (lss)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
133992716 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
E2F_TDP
EspB_PE
Motif
Other DBs
NCBI-GeneID:
133992716
NCBI-ProteinID:
XP_062287405
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Position
13:25632433..25646808
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AA seq
753 aa
AA seq
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MNSFCSVEDLTLYLTTAAMTEGTHLRRRGGPYKTEPVTDMSRWRLTNVEGRQTWRYVEDE
ETPDREQTMLEAHSLGLDTTKFVSGSPAAHTAVDAALKGMNFYRHLQAEDGHWAGDYGGP
LFLLPGLLITCHVAKIPLGAAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSL
RILGVEPDDPDMVRARNNLHSKGGAAGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTW
MPAHPSTLWCHCRQVYLPMSYCYAVRLAAEEDSLVLSLRQELYVQDYATIDWPAQRNNVA
ACDIYTPHSTLLTVAYMVLNVYEAHHSSMLRGMAVKELYDHIQADDRFTKCISIGPISKT
INMLVRWYVDGPSSAVFQEHVSRIPDYLWLGLDGLKMQGTNGSQLWDTCFAVQAFLEAGA
QDNPRLAECLRDAHQFLALTQIPDNPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGL
KSVMLLQELCSSISQPIRSERLYDAVNVLLSMKNSDGGFATYETKRGGKLLELLNPSEVF
GDIMIDYTYVECTSAVMQALRHFQKAHPEHRAEEISSTLREGLEYCRKVQRPDGSWEGSW
GVCFTYGAWFGLEAFACMGHVYKDEDVCVEVQKACQFLLDWQMPDGGWGEDFESCEQRCY
IQSSEAQIHNTCWALLGLMAVRHPDQRAIERGVQLLIDKQLPNGDWPQENIAGVFNKSCA
ISYTSYRNVFPIWTLGRFSTLYPFSPLTGKIKL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattctgttcagtggaggatttaactctgtatctgacaactgcggcgatgacg
gagggaacacacctgcggaggcgaggagggccgtacaagacggagcccgtcacagacatg
agccgctggaggctgaccaatgtggagggcaggcagacgtggcgttatgtggaagatgaa
gaaactccagacagagaacagaccatgttagaagcccattcgctgggtctcgacacgact
aagttcgtctctggctcgccagccgcccacacggctgtggatgctgctctgaaaggtatg
aacttctacagacacctccaagctgaggacggtcattgggcaggagactacggcggccct
ctcttcctgctaccaggtctcctgattacgtgtcatgtggctaaaatccctctgggagcg
gcctggaagaaggaaatggtgcgatacctgcgctccgttcagctgccagatggaggctgg
ggactacatattgaagataagtcgaccgtgtttggcacagcgctgagctacacctcgtta
aggatcctcggagtggagcctgatgatccagatatggttcgagccagaaacaacctgcac
agcaaaggaggtgcagcaggtattccttcgtggggtaaattctggttggccattttaaat
gtctacagctgggaagggatgaacacactcctgccagagatgtggttgttccccacctgg
atgccagctcacccctccaccctgtggtgtcactgtcgccaggtttacctccccatgagt
tactgctacgctgtcagactggcagcagaggaggactcgctggtcctcagcctcagacag
gagctctatgtccaggactacgccaccatcgactggccggctcagaggaacaatgtggca
gcttgtgacatatacacacctcacagcaccctgctcaccgtcgcctacatggtgctgaac
gtgtacgaagcccaccacagcagcatgctgagggggatggctgtcaaagagctgtacgat
cacatccaggccgacgaccgtttcactaaatgtatcagcatcggaccgatctccaagacg
atcaacatgctggttcgttggtacgtggacggtccgtcctctgcggtctttcaggagcat
gtctccaggatcccagactacctctggttgggattggacggcttgaaaatgcagggaacc
aacggatctcaactctgggacacttgttttgctgtgcaggctttcctcgaggcgggagcc
caggataaccccagactcgctgagtgcctccgagacgcccatcaattcctcgctctcaca
cagattcctgataatcctcctgaataccaaaaatactacagacaaatgaacaagggaggt
ttccccttcagtacccgcgactgtggctggatcgtggccgactgcacagccgagggcctg
aagtcagtgatgctgctgcaggagctctgttcctccatcagccagccgatccgctcagag
cgcctctacgatgccgtcaacgtgctgctgagcatgaaaaactcagacggtgggtttgcc
acgtatgaaacgaagagaggagggaaactactggagctgctcaacccctctgaggtgttt
ggtgatatcatgatagattatacctatgtggagtgtacatcagccgttatgcaggctctg
aggcatttccagaaggcccatcctgaacaccgtgctgaggagataagctccacccttaga
gaaggactggagtactgcaggaaggtgcagaggcctgatggatcctgggaagggtcttgg
ggagtgtgcttcacatatggagcgtggttcggcctcgaagcttttgcttgtatgggtcac
gtctacaaggatgaggatgtgtgtgtggaggtgcagaaagcctgtcagttcctgctggat
tggcagatgccagacggaggctggggggaggactttgagtcgtgtgagcagcgttgttac
atccagagcagcgaggctcagatccacaacacctgctgggctttgttaggcctcatggct
gtcagacatcctgaccagcgggccattgagagaggagtccagctgctgattgacaagcag
ctgcccaacggagactggccacaggagaatattgcaggtgtgttcaacaagagctgcgct
atcagctacacctcctacagaaacgtcttccccatctggaccctcggacgcttctcaaca
ctttaccccttcagtcccctaactgggaagatcaagctgtga
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