Scomber scombrus (Atlantic mackerel): 133992749
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Entry
133992749 CDS
T10651
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133992749 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133992749 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133992749 (si:ch211-269e2.1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
tRNA_bind_3
RMI1_C
DUF4140
Motif
Other DBs
NCBI-GeneID:
133992749
NCBI-ProteinID:
XP_062287451
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All DBs
Position
13:8338440..8353274
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AA seq
1173 aa
AA seq
DB search
MIPDPTAAAASRPSELDNNSQDQANSSEAVNHSEDESGNENRQKSVRRRRRAHKGSENVK
CKKAKAGRRSVSRKGGSQSKRRHVEAVTLFEVITMGRSAMQMVIDDWIEAYVTDRDTSLL
DLISFFIQCSGCKGVVTAEMCQSKEDSDVMSKMVEKLDEVAGLQYKKFLAFPWILTVTWP
MDTDSVEYPLIQSGPYGRWFHSEFCDFVSVLVAQCQHSIIFDNYLMSTLISLLTELSNSY
IRAFRHTCTLAAVKLMSSLVSVALSLSVSIENSQKLHAVQKTKTMRQKSTPQQERIQKKI
TELQEKRAEIEGMMDVIFKGIFLKRYRDVLPEIRSICMEELGLWMKLYSSVFLSDSYLKY
MGWMMHDKIPDVRLKCVLGLQGLYGDPGLLPKLDLFTSRFKDRMISMTLDKDNEVAVQTM
KLLVLISKTSDDVLSPADYKQLFQFVYSSQRPLAATAGELLFSRLLNTLAPASDDHDGLN
EEEAHKEQTFARLKALLQFYQESELHKHVVYLVDSLWDCGGALLKDWPALTSILMQDSSS
QSSEQAVLVEIMVASVRQASEGPMLAGRSGAKKVMSAREKKAQIDDCSKLTEHLLPVLPK
LLSKFSGSSDIVASLMKIPQYFLPECPEAANTEVTSILMAEMGAVLELHSYPAVLEAAAR
AFLSLCGEETTWSSTAQTARDSLVQGWVDQLTALLEDSLKGDSFSADEEKTSEILATLKK
LRAFHNCHNLSRWNLFELLSPLLSAESSQGGAPPKVLLEVLPCLCYSMLWSLNMSGETLK
SRDKAVAQRLQLRLFCERSHHHLSHYDHSVRLQAFLGVCDVLTAHSYQLQVWDPSSFGPL
LYTPIPKLQRALLTFVCVHVFVGTDCDIQSSVSANSEVERLEDLHKRRNLLAAYCKLIVH
RVLEMSMAAEIFMYYMKHHNDFGDIIKETMYRTRQIDKIESARTLVLCLQQLFVRLKREQ
ESGGRPHPGVQTFTSIKELARRFALTFGDLVKFRECVVMIHRNGIEFVFQEFNQTPETPT
PPYLSYLTILSEFSSKLLKPDKKTLFSYLQKHTAEHFVDLREEGWQPLIYYRASLLAVAE
GEDAVSYVSSDRKPYLPNRSPFSKKLEGSKSPCPFNPVESKVSKVQRSGFSPSHQDMDPF
SVPVEPHARRLTTEGSVLSTGNEADDDTIDVEV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgataccagatcccacagctgcagctgcatctaggccctcagagctggataataactct
caggatcaggcaaactcatccgaagctgtcaatcattcagaggatgagtccgggaatgag
aacagacaaaagagcgtgagaagaaggagaagagcacacaagggttcagagaatgtcaag
tgcaaaaaagccaaagctggccgcaggagcgtcagcagaaaaggtggcagccagagtaaa
cggaggcatgtggaggctgtcaccctgttcgaggtgatcaccatgggcagaagtgccatg
cagatggtgattgatgattggatcgaggcgtatgtgacagacagagacacgtctctcctt
gatctcatcagcttcttcatccagtgctctgggtgcaaaggtgtggtcacagcagagatg
tgtcagagcaaagaggacagtgatgtcatgagtaagatggtagagaagctggatgaggtc
gctggtctgcagtacaagaagtttctggcgtttccatggatcctcacagtcacatggccc
atggatacggacagtgttgagtatcctctcatacagtccggcccgtatggccgctggttt
cactctgagttctgcgactttgtgtcggtgctggtggctcagtgtcagcacagcatcatc
tttgacaattacttgatgagcaccctcatctcactgctcactgagctgtccaactcgtat
atacgagccttcagacacacctgcacgctggcagcggtgaagctgatgagctccctggtg
agtgtggctctgagcctgagcgtcagcattgaaaacagtcagaaactgcatgcggtgcag
aagacgaagactatgaggcagaaaagcacaccccagcaggagagaatacagaaaaagatc
acagagctgcaggagaagagagcggagatagagggaatgatggacgtcatcttcaaggga
atctttctgaagagatatcgtgatgtgcttccagaaattcgctctatttgtatggaggaa
ttgggtttgtggatgaagctctacagctctgtatttctcagtgatagttacctcaaatac
atgggctggatgatgcacgacaagataccagatgtgcgtcttaagtgtgtattaggtctg
cagggtttatatggagatcctggcctcctgcctaaactagacctgttcaccagccgcttc
aaggaccggatgatctccatgactctggacaaggacaatgaagtggctgtgcagaccatg
aaactgctggtgctcatctccaaaacgtccgacgatgtgctcagtccagcggactacaag
cagctgttccagtttgtgtattcctcacagcgccctcttgcagccactgcaggagagcta
ctcttctcaaggcttctcaacaccttggctcctgcatctgatgatcatgatggattaaat
gaggaggaggctcataaagaacaaacctttgccagactgaaggctctgttgcagttctat
caggagtctgagctgcacaagcatgtggtgtacctggtggacagtctgtgggactgtggt
ggagccctgctgaaggactggcccgcactcacatctatactgatgcaggactcttcctca
cagagctcagaacaagcggtgctcgtggagatcatggtagcatcggtgcgccaggcctca
gagggaccgatgctggcagggaggagtggagcaaagaaggttatgagtgccagagaaaag
aaagctcagattgacgactgctctaagctcactgaacatctccttccggtgctcccaaag
ttactgtccaagttttcaggtagctcagacattgttgcctccctgatgaagatccctcag
tacttcctcccagagtgtcctgaggctgcaaacacagaggtgacatccatcctgatggca
gagatgggagcagtgctggaactccactcgtatcccgctgtcctggaggcggcggcccgc
gctttcctcagtctgtgtggggaggagacaacctggagctccacggctcagactgccaga
gactccctggtccagggctgggtggaccaactgacagcactgctggaggactcactcaag
ggcgacagtttctctgctgacgaagagaaaacatccgaaattttagccacactgaagaaa
ctcagagctttccacaactgtcacaacctctcccggtggaatctgtttgagctgctgtcc
cctctcctgtcagcggagagcagccagggaggagcgccgcccaaggtgctactggaagta
ttaccgtgtctgtgttactccatgctctggtctctcaacatgagtggtgaaactttaaaa
tccagagataaagctgtggcccagaggctccagctgcgtctgttctgtgagaggagtcat
caccatctctcccactacgaccacagtgtgaggctgcaggcttttttgggtgtctgtgac
gtcctgacggctcattcctaccagctacaagtgtgggatccctcctccttcggtccactg
ctctacacacccattcccaaactgcagagggcgctgttgacctttgtatgcgtgcacgtc
tttgttggcacagattgtgacatccagagcagtgtcagtgcaaactctgaagtggagagg
ctggaggaccttcacaaacgaagaaatctgcttgcggcttactgcaaactgatagtacac
agagtgctggagatgagcatggcagctgagatcttcatgtattacatgaagcaccataat
gactttggagacatcatcaaggagacaatgtacaggaccaggcagatagataagatagag
agcgctcgtacgctggtgctctgtttgcagcagctgtttgtgcgtcttaaacgggagcag
gagagcggagggaggcctcacccaggagtccagaccttcaccagcatcaaggagctggcc
aggcgcttcgccctcacgttcggagacctggtcaagtttcgtgaatgtgtcgtcatgatc
cacaggaacggcatagaatttgtgtttcaagagttcaaccagaccccagaaacacccaca
ccgccgtacctctcctacctgaccatactgagtgaattctccagcaaactactcaagcca
gacaagaagacattgttctcttacctgcagaagcacactgcagagcactttgtagacctc
agggaggagggctggcagccactcatctactatcgagcttctctgttggccgtcgctgaa
ggggaggatgctgtgtcctacgttagctccgataggaagccctacctgcccaatcgttct
cccttctccaaaaaactagaaggaagtaaatctccttgtccgttcaacccggttgagtcc
aaagttagtaaagttcaaagatccggttttagtccaagccatcaggatatggatccattt
tctgtccccgtggaacctcatgcaagaagactgaccactgagggatctgtcctcagcacc
ggcaacgaggcggatgatgacacaattgatgttgaggtctaa
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